Gene Hmuk_0260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_0260 
Symbol 
ID8409758 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp257865 
End bp259034 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content71% 
IMG OID645018585 
Productnicotinate phosphoribosyltransferase 
Protein accessionYP_003176104 
Protein GI257386331 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1488] Nicotinic acid phosphoribosyltransferase 
TIGRFAM ID[TIGR01513] putative nicotinate phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.012678 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGAGT CGTTCGACAT CGTCTCGCCC GAGCAGATTC GCTCGGGTCG GGCGACCGAC 
GCCTACTTCG ACCGGACGAT CGAGGCACTG GACCACGCCG GCAAGAACCC ACACGTCGTC
GCGGAGGTGA CCGCAGACCA GTTCCCGACC GGCGAGTGGG AGCTGCTCGC GGGGCTGAAA
GACGCGGCCC ACCTCTTCGA GGGACGAGGC GTCGACGTGG ACGCGATCCC GGAGGGGCGG
CTGTTCGACG GCGGTCCGGT CGCACGGATC GAGGGGCCGT ACCGGGAGTT CTGTCGGCTG
GAGACGGCCC TTCTCGGCTT TCTCTCTCAC GCGACCGGCG TCGCCACGCG GGCGCTGGAG
GCCCGCCGTG CGGCCCCCGA CTCGCAGGTC CTCTCCTTTG GCTCTCGGCA CGTCCACCCC
TCGATCGGCG CGATGGTCGA GCGGTCGGCG CTGCTCGCCG GCCTCGACGG CATCTCGAAC
GTCGCAGCTG GCGAGGTGCT GGACCGGGCG GCCGGCGGGA CGATGCCCCA CGCGCTGGTG
ATCTGCTTCG GTCGCGGCAA TCAGGAAGAC GCCTGGCGGG CTTTCGACGA GGCCGTCGAC
GCCGACGTGC CCCGGATCAC GCTGTGTGAC ACCTACAGCG ACGAGGTCGA CGAGTCGCTG
CGGGCGGCCG CGGCGATCGA GGACTTAGAG AGCGTCCGCA TCGACACGAC CGGCTCCCGG
CGCGGGGACT TCGAGCACAT CCTGAAGGAG GTGCGCTGGA CGCTGGACGC TCACGGCCAC
GAGGACGTGG GAATCTTCGC CAGCGGCGGT CTGGGACCGA CGGAGCTGGC GCGGCTGTCC
GGCGTCGTCG AGGGGTTCGG CGTCGGCGGG TACGTCAGCA ACGCCGATCC GGTCGACTTC
GCGCTGGACA TCGTCGAGGT AGAGGGCGAG CCGGCCGCCA AGCGCGGGAA GCTCACGGGC
ACGAAGCAGG TGTATCGCAC GCCAGACGGC GGCCACCACG TAGGGCTTGC AGACCGAGCG
GGGCCGACGG ACGGGCAGGC CCTGCTCGAA CCGCTCGTGC GCGACGGGAC CGTCGTCCGC
GAGTTCGATC TGGACGCCGC CGCCCAGCGG GCGGCCGACG ACGCCGACGC CGTCGGGTTC
GAGCCCGTCG ACGGCGGGAC GAAGGCTTAA
 
Protein sequence
MTESFDIVSP EQIRSGRATD AYFDRTIEAL DHAGKNPHVV AEVTADQFPT GEWELLAGLK 
DAAHLFEGRG VDVDAIPEGR LFDGGPVARI EGPYREFCRL ETALLGFLSH ATGVATRALE
ARRAAPDSQV LSFGSRHVHP SIGAMVERSA LLAGLDGISN VAAGEVLDRA AGGTMPHALV
ICFGRGNQED AWRAFDEAVD ADVPRITLCD TYSDEVDESL RAAAAIEDLE SVRIDTTGSR
RGDFEHILKE VRWTLDAHGH EDVGIFASGG LGPTELARLS GVVEGFGVGG YVSNADPVDF
ALDIVEVEGE PAAKRGKLTG TKQVYRTPDG GHHVGLADRA GPTDGQALLE PLVRDGTVVR
EFDLDAAAQR AADDADAVGF EPVDGGTKA