Gene Hmuk_0258 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_0258 
Symbol 
ID8409756 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp253406 
End bp254416 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content68% 
IMG OID645018583 
Productoxidoreductase domain protein 
Protein accessionYP_003176102 
Protein GI257386329 
COG category[R] General function prediction only 
COG ID[COG0673] Predicted dehydrogenases and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0215692 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGTCC CGATCGCACT CTCACGCATG GAATTCGGAG TTCTCAGTAC GGCGGCGATC 
GGCCGCGAAG ACGTGATCCC GGCGATCCAG GCCAGCGAAC ACGCCGTCGG CGCGATCGCT
TCACGCGACG CCGAGCGCGC CCGGTCGGTC GCCGACGAAC TCGACATCGA TCGGTCGTAC
GGCAGCTACG AGGCGCTGCT GGCCGACGAG GGGATCGACG CCGTGTACAA CCCGCTACCG
AACAGCCTCC ACGCGGAGTG GACACGCCGC GCTGCCGATC ACGGACTGCA CGTCCTCTGT
GAGAAGCCTC TGACGCCCGA CGCCGAGCAG GCCCGCGCGC TCTTCGACTA CTGCGACCGG
CAGGGCGTCA CTCTGATGGA GGCGTTCATG TACCACTTCC ATCCTCGCAC CGAGCGCGCC
CGCGAGATCG TCCGCGAAGA ACTCGGCGAG GTGCGCCACG TCGAGGCGAC GTTCACCTTC
GGGATGGGCG ACCGCACCGA CGACATCCGG CTCGATCCGG CACTGGACGG CGGTTCGCTC
ATGGACATCG GCTGCTACGC CGTCAGCGCG GTCCGGAACG TGCTGGGCGA GCCGAACCGC
GCGTTCGCCC ACGCTGCCGA CACCTACGAT ACCGGCGTCG ACTCCCAGCT CTCGGGCCTG
CTGACCTACG ACGACGGCGT GACGGCGCAG ATCACCAGCA GCTTCGACAC GCCGATGACC
CACGAGTACC GGATCATGAC GGCGGACGGC TGGCTCCACG TCCCCGAAGC ATTCGACGTG
GCCCCCGACC AGTCGGTGTC GCTCACCTAT CAGGTCGACG GCCAGCGACA CACCGAGACC
ATCGACGGCG TCGACCACTA CCGCCGCCAG GTCGAGAGCT TCGCCGACGC CGTCGCGGCC
GACGAGACGC CGCCCGTCGA CCGGACGGAG ACGGTCGACA ACATGGCCGT CATCGACGCC
CTCTACGAGA GCGCCGAGAC GGGCGAGCCC GCAGCCGTGG ACGGCGAGTA A
 
Protein sequence
MPVPIALSRM EFGVLSTAAI GREDVIPAIQ ASEHAVGAIA SRDAERARSV ADELDIDRSY 
GSYEALLADE GIDAVYNPLP NSLHAEWTRR AADHGLHVLC EKPLTPDAEQ ARALFDYCDR
QGVTLMEAFM YHFHPRTERA REIVREELGE VRHVEATFTF GMGDRTDDIR LDPALDGGSL
MDIGCYAVSA VRNVLGEPNR AFAHAADTYD TGVDSQLSGL LTYDDGVTAQ ITSSFDTPMT
HEYRIMTADG WLHVPEAFDV APDQSVSLTY QVDGQRHTET IDGVDHYRRQ VESFADAVAA
DETPPVDRTE TVDNMAVIDA LYESAETGEP AAVDGE