Gene Hmuk_0205 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_0205 
Symbol 
ID8409703 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp201058 
End bp202023 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content61% 
IMG OID645018530 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003176049 
Protein GI257386276 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0614092 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAACAG TGTCACGCCT CACACAACGA GTCGAGCGGA TCCCCTTCAT CGAGCAGGAG 
GACTACTCGC TCCTGTTCGT GCTCCCGGGG TTGTTCGTGT TCGCAGCGTT CATGCTGTTC
CCCGTCCTGT ACCTCGTCGG CCTCTCGTTT ACCGATGCGG CGCCAGCGAA CCTCTTCGCC
GGTGAGGGGT CGTTCGCGGT GTTGACCTTC GGTGAGGCGA CCTTTGTCGG ACTCAAGAAC
TATACCGACG TGCTCGCCGA TCCCGAGTTC TGGAACTCCT TCGGGGTGAC GTGGCTGTAC
GTGGCCACGA GCGTCGCCCT GAAACTCGGC TTGAGCATCA GCGTCGCGAT GGTCGTCACC
AGCGATCGGG TGCGCGGACG GCGAATCATG CGGTCACTCA TCATCCTCCC GATGGGACTG
CCAGCGATCT TTACGATCAC CGTCTGGCGA TCGATGTTCA GTTCTGCCGA TTTCGGACTG
ATCAATCAGC TCTTCGAACA GTTCGGTGCC GAGCCCGTTG CGTGGCTCTC GACCCGATGG
CCGGCCTTTT TCGCGTACAA CGTCACGGAG ATGTGGCTGG CGTACCCGTT CATGGTAATC
ATCACAGTTA GTGCCCTGCA GGACGTACCC GAAGAGTTGC ACGAGGCGGC GACGGTCGAC
GGCGCGGGCT TTCTCGCCCG ATTCATCCAC GTCACGCTGC CATCGATCAA GCGGCCAGTG
CTGTTCGCAG CGATTCTGAC GGCCGCCGCG TCGTTCCAGC AGTTCCTGAT CCCTTTCGTG
TTCAACCAGG GTGGACCGGC GCGAGCGAAC GAACTCATCG TCGTCTACGG GTACAGAGAG
GCCCTCTCCT TCTCCCAGTA CGGCCGCGGG GCAGCGATCA GCCTCATTGC GGTCGTCTTC
ATCGGCGTGT TCATGTGGAT CAACGTCAAA CGTGGCAAGC TCGCTGACGG GGTGTCTGAC
GAATGA
 
Protein sequence
MRTVSRLTQR VERIPFIEQE DYSLLFVLPG LFVFAAFMLF PVLYLVGLSF TDAAPANLFA 
GEGSFAVLTF GEATFVGLKN YTDVLADPEF WNSFGVTWLY VATSVALKLG LSISVAMVVT
SDRVRGRRIM RSLIILPMGL PAIFTITVWR SMFSSADFGL INQLFEQFGA EPVAWLSTRW
PAFFAYNVTE MWLAYPFMVI ITVSALQDVP EELHEAATVD GAGFLARFIH VTLPSIKRPV
LFAAILTAAA SFQQFLIPFV FNQGGPARAN ELIVVYGYRE ALSFSQYGRG AAISLIAVVF
IGVFMWINVK RGKLADGVSD E