Gene Hmuk_0188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_0188 
Symbol 
ID8409686 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp183697 
End bp185328 
Gene Length1632 bp 
Protein Length543 aa 
Translation table11 
GC content65% 
IMG OID645018513 
ProductNADH-ubiquinone oxidoreductase chain 49kDa 
Protein accessionYP_003176032 
Protein GI257386259 
COG category[C] Energy production and conversion 
COG ID[COG0649] NADH:ubiquinone oxidoreductase 49 kD subunit 7 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACGAG CCACGAGAGC ATCCACAGAG CCGCTGTCGG TGCTCCCCGA GTCAGCCGTC 
GTCGGAACGG AGGACCACGA GAACGCGCCA GCGATCGTCG TCCGCGCGGA CGCCGTCGAG
TCGGTCCTCT CGACGCTGAA GACGGAGGCG GGCTACGACC ACTGCGCCTG CGTCACGGCA
CAGGAGTACG GCGATCGCTT CGAGACGATC TATCACCTCC GGACGTACGA CGACCCGACC
GACGAACTCT CGGTGGTCGT CCCGACGTTG CACGACGACC CCCACTCCGA GAGCGGGGCG
GGCGTCTACG AAACGGCGGC GTGGCACGAG CGCGAAGCGT ACGATCTGCT CGGCATTACC
TACGAAGGAC ATCCGGATCT GCGACGGATT CTACTGCCCG AGACCTGGCA GGGCCATCCG
CTCCGGGAGT CGTACAACCA GGACAAGCCA CAGATCGTCC CGTTTCGCGA ACACGAGCGC
ATTCTGGAGG ACCGCCGTTC CGGACCGGAC ACGATGCACC TCAACATGGG GCCACACCAC
CCCTCGACCC ACGGCGTCTT GCACCTGCGC GTGACGCTCG ACGGCGAGAC CGTCGCGGAC
GTAACTCCCG AGATCGGGTT CATCCACCGC TGTGAAGAGC AGCTGTGTCA GCAGGGAACT
TACCGCCACC AGATCATGCC CTACCCCGAC CGGTGGGACT GGAGCGGTGC CGGGCTGCTC
AACGAGTGGG CCTACGCGCG CGCCGCGGAG GACCTGATCG GCGTCGACGT GCCCGAGTAC
GCGCAGGTGA TCAGGACGAT GAGCGCGGAG CTGTCGCGGA TCCTCTCGCA CTTCCTGGCG
ATCGCGGCCT ACGGGCTGGA CGTGATCTCG GAGTTCACCG CCGTGTTCCA GTACGGCATC
CGCGACCGAG AGATCGTCCA GGACATCCTG GAAGACCTCA CCGGCCAGCG GCTGATGTTC
AACTACTTCC GGCTGGGCGG CGTCGCCTGG GACCTGCCCG AGCCCCGCGA GACGTTCTGC
GAGACCGTTC GGTCGTTCCT CGACGACCTG CCCCAGAAGC TCGAAGAGTA CCACGACCTG
CTCACCGGCA ACGAGATCCT CCAGATGCGG ACCGTCGACA CCGGCGTGCT CCCACCAGAG
ACGGCCAAGG CATACGGCTG TACGGGGCCG GTCGCGCGTG GCTCCGGCGT CGATTGCGAC
CTGCGCCGGG ACGATCCGTA CGGCTACTAC GACGAACTCG ACTGGGACGT GGTCACCGAA
GACGGATGTG ACAACTTCTC GCGTGTGCTC GTGCGCCTGC GCGAGATCGA GGAGTCGGCC
AAGATCATCG AGCAGTGTGT CGACCTGCTC GAAGAGTGGC CCGAAGACGA CCGCACGATT
CAGGGCAACG TCCCCAGAAC CGTCCGCCCC GACCGCGACG CCGAGATCTA TCGGGCAGTC
GAGGCCGCCA AGGGGGAACT GGGCATCTAC ATCCGCTCGG ACGGCACCGA CACACCAGCA
CGGTTCAAGA TCAGAGGCCC CTCGTTCTCG AACCTCCAAT CACTCCCGGA GATGGCAGAA
GGCGAGTACA TCCCCGATCT GGTCGCCTCC ATCGGAAGCC TCGACACGAT CATGGGCGAA
GTCGACCGGT GA
 
Protein sequence
MQRATRASTE PLSVLPESAV VGTEDHENAP AIVVRADAVE SVLSTLKTEA GYDHCACVTA 
QEYGDRFETI YHLRTYDDPT DELSVVVPTL HDDPHSESGA GVYETAAWHE REAYDLLGIT
YEGHPDLRRI LLPETWQGHP LRESYNQDKP QIVPFREHER ILEDRRSGPD TMHLNMGPHH
PSTHGVLHLR VTLDGETVAD VTPEIGFIHR CEEQLCQQGT YRHQIMPYPD RWDWSGAGLL
NEWAYARAAE DLIGVDVPEY AQVIRTMSAE LSRILSHFLA IAAYGLDVIS EFTAVFQYGI
RDREIVQDIL EDLTGQRLMF NYFRLGGVAW DLPEPRETFC ETVRSFLDDL PQKLEEYHDL
LTGNEILQMR TVDTGVLPPE TAKAYGCTGP VARGSGVDCD LRRDDPYGYY DELDWDVVTE
DGCDNFSRVL VRLREIEESA KIIEQCVDLL EEWPEDDRTI QGNVPRTVRP DRDAEIYRAV
EAAKGELGIY IRSDGTDTPA RFKIRGPSFS NLQSLPEMAE GEYIPDLVAS IGSLDTIMGE
VDR