Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hmuk_0145 |
Symbol | |
ID | 8409642 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halomicrobium mukohataei DSM 12286 |
Kingdom | Archaea |
Replicon accession | NC_013202 |
Strand | - |
Start bp | 146595 |
End bp | 147239 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 645018470 |
Product | Haloacid dehalogenase domain protein hydrolase |
Protein accession | YP_003175990 |
Protein GI | 257386217 |
COG category | [R] General function prediction only |
COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.876295 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGTCGTCT CGTTCGACTG TTTCGGCACG CTCGTAGACG CCGACCGACC CGAGGAGCCG TGGGCGGCCG TGGCCGACGC GCTGGCCGCC CGCGACGTGA CGGTCCCGTC CGACTGGGAG GCGGCCTACC GCAGCTCACA CCGGGAGTAC GAACGGGGCG CGGAGGCACC GCTGGACGAG CACGTCCGAC TCGCGCTCGC CAGTCGTGGC GTCGATATCG AGGGCGAGGC CGCACACGAC GCGACGCTGG CGGCGTTCGA CTCGCCAGTG ACCGTTCGGG ACGGCGCTCG GATCGCGCTC GCGAGCGCGC GCGAGTACGG TCCAGTGGCG GTCTGCTCGA ACTGCAGCGT CCCCGGCCTC GTCGAACGGA CGCTCGACCG CGCCGACCTC GCCGTCGATT CCGTCGTGAC CAGCGTCGGC TGTGGCTGGC GCAAGCCCCA CCCGACGATC TTCGAGCGGA CGGCGGCGGC GCTCGCGGTC CCGCTCGACG AACTCGTCCA CGTCGGCGAC GACGCCCGTA CCGACGGCGG TGCGGACCGC GTCGGCGCGA CTGCGCTCGT ACTCGACGAC GTGGCGCTCT CGGCGGTGCC CGAGTGGCTC GCGGCCGCCG TGGCCGACGC AGCGTCCGGG GAGGAGCCAC CGTGA
|
Protein sequence | MVVSFDCFGT LVDADRPEEP WAAVADALAA RDVTVPSDWE AAYRSSHREY ERGAEAPLDE HVRLALASRG VDIEGEAAHD ATLAAFDSPV TVRDGARIAL ASAREYGPVA VCSNCSVPGL VERTLDRADL AVDSVVTSVG CGWRKPHPTI FERTAAALAV PLDELVHVGD DARTDGGADR VGATALVLDD VALSAVPEWL AAAVADAASG EEPP
|
| |