| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hmuk_0126 |
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| Symbol | |
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| ID | 8409623 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halomicrobium mukohataei DSM 12286 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013202 |
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| Strand | + |
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| Start bp | 128506 |
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| End bp | 130719 |
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| Gene Length | 2214 bp |
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| Protein Length | 737 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 645018451 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_003175971 |
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| Protein GI | 257386198 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0630] Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0721545 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.429419 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCACAG AGGGGGAGGG AGAGACGAGC GCCCCGACGG TCCCGGCACC CGTCACGCCG
GACGACCCGA ACGCGTGGTA CGCACCCGAC GTTCGCGATC AGGACGAGAT CCACCCCGGC
GTCGTCGTCA CCGTCACCGA GACGGCGGCC GGATTCGAGT ACGACCTTCG GGACCCGCTG
CTGTCGGTCG ACGACGCCGA CGCGCTCGCG ACCGTCGAGG AGTACTTCGC CGACGCGCAC
GTAGATCGGC CGCGCACGCG CGAGGGAGCG ATCGAACGCG TCGAGTCGGG GCTCGACGAG
AAACACCAGC GGGTGATCGA CCGTCTCGTC GACTGCTCGC CCGCGTCCAG ACGACGACTC
GACTACCACG CGCTGTGCTC GCTGGCCTGC CTGGGTGAGT TGACGCCCTA CGCGCTGGAC
GACCGCATCG ACGTGGCCGA TCTGGGTTCG GGGTCCGTGC GCGTCCACAC CGACGATTTC
GCCCCCGCAG AGACCGATCT CGATCCGGAC ACGGAGTTTC TGGACCGCTT TGCCAGCGAG
CGGCTCGAAC AACACACTGT CACCTTCCAC GAGTTCGAGA TCCCCGTGAT CGTCTACCGG
GAGAACGTCC TGGGCGACGA TCCGTTCACC ACGAAGTACG CGGTCCGCGA ACCTGACCAG
CTGCCGGGCG ACGAAGAGCT CATCGAGGCC TGCAAGACGC GCGTCTGGGA GGCCAGCATC
GACGGGGTGC TCGAAGACGA GGTCGCGTTC GTCCGCGACC GGGCTCGGAC GCTCCTCTCG
CGACAGCTGA CCATCCGCAA CACGCGGGCC TGGTTCGACG CGGCGCGGTA CCGGCTCCGG
ACGGCGCTGG CGGAGTACGA CCTGACGGTG CCGCCGGTCG ACCGTCGCTT TGCCGACGAC
CGGCTGGAGG ACCTGCTGTA CTACGTGCTG CGTGACCTCG TGGGGTACGG GAAGCTGACG
GTCCCGGTCC GGGACCCGAC GCTGGAGGAC ATCGAGGCCA ACAGGGTCGA CGAGCGGATC
AAGGTCGTCC CGCGGCTGGA CGTGGGCCAC AACGAACGCG TCCCGACGAA CCTCTGCTTC
GAGAGCGAAC GGGCGTTCGT CAACGTCGTG ACCAAGCTCG CGGCCGACGA CGGCACCGAA
CTCAACGCCT CGACGCCGAG CGCGAAGGTG AACCTCAGCC CCGAGGGCGT CGAGGAGACG
ATCCGGTGTG CCGTTGCACT CCCGACGATC AGCGAGGACG GCCCACACAT CTCCATCCGG
AAGCAGTCGC CCGATCCGAT GACCCCCGTC GACCTGATCG AACGGGACGC CCTCCCGACG
GAACTGGTCG CACTGCTGTG GCTGTTGTAC GAGCACCACG GCGTCGTGCT GTTCTGTGGG
CCGACCGGCG TCGGCAAGAC GACGCTGATG AACGCCCACA TGCCGTTCAT CCCCTATCGT
GATCGCCCGA TCTCGATCGA CGAGGGGTCC CGAGAGGTGT TCATCCCACA CGAGACCGGC
GTCTCGCTGA CGACCAGAGA CCACGAGCGG GACCACCGCC GCGTGACGAT GGCCGACCTG
ATGACCGAGT GCAACTACCT GAACCCGGAC GTGGAGGTCA TCGCCGAGGT CAACACGGCA
GCGAGCTTCG AGACGTTCGC CGAGACGCTG AACACGGGCC ACGGGCTGCT CGGGACGACT
CACGCCGAGG ACGTGGAGAC GCTGGTCAAC CGCGTCGTCG AACAGGGCCT GCCCCCCTAC
CTCCTCCAGG AGATCGATCT CCTCGTGTTC CCGAAGCGAG TGGGCGAGGA CCGCTTCGTG
GGAGAGGTCG TCGAGATCGT CGACGAGACC ACCTACCGAG CGCTCGATCG GGACGCCGAC
CGCTGTGGCG TCGTCCGGAA GGCCGACGCC ACGGTGTACT GGAACACCGT CTGCACACGC
GATCGAAACG GCGAGTTCGA ACTCGCGGGG CTGGTCGGCG AAGGGAGCGA TCCGATCCAC
GCCTTCGAGC GGCTGGCCGA CCAGACCGAC CAGACGGTCG ACGGCGTCGA AGCCATGTTC
GAACGCCGAC ACCGCTACGT CCAGTATCTC GTACAGGAGG GGATCACCGA CGCCGACGAG
CTGTTCGCGC TGCTTGCGGA CCTCAAGACC GACGAGGCGG CGACGGTCGA GCGGCTACAC
CGCCAACGGG CCGACGAACC GACGGTCCGC GGGGAGGAGA TCGATGGCGA CTGA
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| Protein sequence | MLTEGEGETS APTVPAPVTP DDPNAWYAPD VRDQDEIHPG VVVTVTETAA GFEYDLRDPL
LSVDDADALA TVEEYFADAH VDRPRTREGA IERVESGLDE KHQRVIDRLV DCSPASRRRL
DYHALCSLAC LGELTPYALD DRIDVADLGS GSVRVHTDDF APAETDLDPD TEFLDRFASE
RLEQHTVTFH EFEIPVIVYR ENVLGDDPFT TKYAVREPDQ LPGDEELIEA CKTRVWEASI
DGVLEDEVAF VRDRARTLLS RQLTIRNTRA WFDAARYRLR TALAEYDLTV PPVDRRFADD
RLEDLLYYVL RDLVGYGKLT VPVRDPTLED IEANRVDERI KVVPRLDVGH NERVPTNLCF
ESERAFVNVV TKLAADDGTE LNASTPSAKV NLSPEGVEET IRCAVALPTI SEDGPHISIR
KQSPDPMTPV DLIERDALPT ELVALLWLLY EHHGVVLFCG PTGVGKTTLM NAHMPFIPYR
DRPISIDEGS REVFIPHETG VSLTTRDHER DHRRVTMADL MTECNYLNPD VEVIAEVNTA
ASFETFAETL NTGHGLLGTT HAEDVETLVN RVVEQGLPPY LLQEIDLLVF PKRVGEDRFV
GEVVEIVDET TYRALDRDAD RCGVVRKADA TVYWNTVCTR DRNGEFELAG LVGEGSDPIH
AFERLADQTD QTVDGVEAMF ERRHRYVQYL VQEGITDADE LFALLADLKT DEAATVERLH
RQRADEPTVR GEEIDGD
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