| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hmuk_0123 |
|---|
| Symbol | |
|---|
| ID | 8409620 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halomicrobium mukohataei DSM 12286 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013202 |
|---|
| Strand | + |
|---|
| Start bp | 124525 |
|---|
| End bp | 125331 |
|---|
| Gene Length | 807 bp |
|---|
| Protein Length | 268 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 645018448 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_003175968 |
|---|
| Protein GI | 257386195 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.0201969 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.963829 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAGCAG ACCCGACAGC CAACGCCGTC CCGAACAGAC ACGCAGACAG CGTCGCCGTC
GTCACCGGTT CGACCCGCGG CATCGGCGCT GGCGTCGCCC GCCGCTTCGC CGCCGAAGGG
GCGTCCGTCG TCGTCACTGG CCGCTCCGTC GAGCCCGGCG AGCGCGTCGT CGCCGAGATC
GAGGACGCGG GCGGCGAGGC GACCTTCCTG CAGGCGGACA TGCGCGATCC CGCCGAGATC
CAGGCGCTGA TCGAACACAC CGTCGAGGAG TACGGCCGCG TCGACACGCT GGTCAACAAC
GCGGGCGTCC AGACCGAGAC CACCGCCAGC GAGGCGACGC TGGACGACTG GGCGTTCGTC
GTCGAGACCG ATTTCCGGTC GTTCTGGCTC TGTGCCAAAC ACGCGGTCGA GCACATGCCC
GAGGGCGGCA CCGTCCTCAA CATGTCCTCG AACCACGCCC GCCTGACGAT GCCCGGCCTC
TTCCCGTACA ACGCCGTCAA GGCCGGCATC GACGGGATGA CCCGCGCGAT GGCGCTGGAG
CTCGGCCCCG AAGGGATCAC GGTCAACACG ATCAACCCCG GCTGGATCGA GATCGAGCGG
ACCAGCGAGG AACTGGGTGA GGACTACGAG TACACCGAGG AGATCCATCC CGTCGGTCGA
CTCGGGACGC CGGCCGACGT GGCCGGTCTC GCCACCTTCC TCGCCAGCGA CGACGCGACG
TTCGTCACCG GCGAGAGCAT CCTCGTCGAC GGGGGGCGCT CACAGGTGAT GCAAGACGAC
GTGTACCTCG ACTACCGTCG AGAGTGA
|
|---|
| Protein sequence | MPADPTANAV PNRHADSVAV VTGSTRGIGA GVARRFAAEG ASVVVTGRSV EPGERVVAEI
EDAGGEATFL QADMRDPAEI QALIEHTVEE YGRVDTLVNN AGVQTETTAS EATLDDWAFV
VETDFRSFWL CAKHAVEHMP EGGTVLNMSS NHARLTMPGL FPYNAVKAGI DGMTRAMALE
LGPEGITVNT INPGWIEIER TSEELGEDYE YTEEIHPVGR LGTPADVAGL ATFLASDDAT
FVTGESILVD GGRSQVMQDD VYLDYRRE
|
|---|
| |