Gene Hmuk_0113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_0113 
Symbol 
ID8409610 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp112665 
End bp113651 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content70% 
IMG OID645018438 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_003175958 
Protein GI257386185 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.556831 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGACG AGCCACTGCT GTCGGTGCGG GACCTCGAAG TCGTGTTCCA CACCGAGCGC 
GAGCAGATCC ACGCCGTCGA CGGCGTGAAC TTCGAGATCC GCGAGGGCCA GACGGTCGGC
CTCGTCGGCG AGTCGGGGTC GGGCAAGTCC GTCACCGCCC GGTCGATCCT CGGACTCGTC
GACGAACCCG GCCGGATCGA GGGCGGCGAG ATCCTGTACC GCGGCGAGGA CCTCACCGAG
GACAACTGGG CGGACCACCG CGGCGACATC GCGATCGTCT TCCAGGACCC GACAAACTCG
CTGAACCCCG TCTACACGAT CGGCAACCAG ATCGAGGAGG CCCTGCGCAT CCACCAGGAC
CTGCGCGGCC GGGCAGCGAC CGACCGCGCC ATCGAGTTGC TGGAGGACGT GGGGATTCCT
GACGCACCGC GACGCGTCGA CGAGTACCCC CACCAGCTCT CGGGCGGGAT GGCCCAGCGG
GCCGTCATCG CGATGGCGCT GGCCTGTGAC CCGGACCTGC TCGTCTGCGA CGAGCCGACG
ACGGCACTGG ACGTGACGAT CCAGGCCCAG ATCCTCGACC TGCTCGCGGA GCTACAGGCA
GAGCAGGACC TCGCGATCCT CTTTATCACC CACGACATGG GCGTCATCGA GGACGCGACC
GACTGGGTCA ACGTCATCTA CGCGGGCGAG GTCGTCGAGC GTGCGCCCAC CGAGGCGCTG
TTCGACCACC CGGCCCACCC CTACACGCGG GCGCTCCTGG AGAGCATTCC GGGGCGGACG
GACCCGGACG AGCGCCTCCC CACCATCGAG GGAGAGGTAC CGACGCCGAC GGGACCGGCG
ACCGACTGCC GGTTCGCGCC CCGGTGTCCC GAGGCCTTCG AGGACTGTCG CTCCGTGGCC
CCCGAGCACG TCTCGCTCGA CGGGGATCGG TCGGCAGCGT GTCTCCTCCA CGATCCGGCC
CGCAGCGACG GGGGTGAGCG ACAGTGA
 
Protein sequence
MSDEPLLSVR DLEVVFHTER EQIHAVDGVN FEIREGQTVG LVGESGSGKS VTARSILGLV 
DEPGRIEGGE ILYRGEDLTE DNWADHRGDI AIVFQDPTNS LNPVYTIGNQ IEEALRIHQD
LRGRAATDRA IELLEDVGIP DAPRRVDEYP HQLSGGMAQR AVIAMALACD PDLLVCDEPT
TALDVTIQAQ ILDLLAELQA EQDLAILFIT HDMGVIEDAT DWVNVIYAGE VVERAPTEAL
FDHPAHPYTR ALLESIPGRT DPDERLPTIE GEVPTPTGPA TDCRFAPRCP EAFEDCRSVA
PEHVSLDGDR SAACLLHDPA RSDGGERQ