| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hmuk_0100 |
|---|
| Symbol | |
|---|
| ID | 8409597 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halomicrobium mukohataei DSM 12286 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013202 |
|---|
| Strand | + |
|---|
| Start bp | 98365 |
|---|
| End bp | 99513 |
|---|
| Gene Length | 1149 bp |
|---|
| Protein Length | 382 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 645018426 |
|---|
| Product | Mandelate racemase/muconate lactonizing protein |
|---|
| Protein accession | YP_003175946 |
|---|
| Protein GI | 257386173 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
|---|
| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.85667 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAATCA CGGACTACGA GCTGTACGGG GTGCCGCCGC GGTGGCTGTT CCTGCGTCTG
GAAACTGACG AGGGGGTCAC CGGGTGGGGC GAGCCGGTCG TCGAGGGGCG AGCCGAGACC
GTCAGGGCGG CCGTCGAAGA GATCATGGAC TCGTACCTGC TGGGGAAAGA TCCACGCCGG
ATCGAGGACC ACTGGCAGGC GATGTATCGC GGCAGCTTCT ATCGGGGCGG CCCGATCCTG
ATGAGCGCCA TCGCCGGCAT CGATCAGGCG CTGTGGGACA TCAAGGGCAA GCAGTACGGG
CTACCGGTCC ACGAACTGCT CGGCGGGCGC AGCCGAGACA AGATCAGAGT GTACCAGTGG
GTGGGGGGCA ACCGACCGGA GGAGCTGGCC GCCGAGGCCG ACCAGCTGGT CGACGCCGGC
TACACCGCGC TGAAGATGGA CGCGACCCAC CAGATGCGCC ACATCGAGTC CCGGGAGACG
ATCGAGGAGA TCGTCGATCG CGTCGAGCAC GTCCGCGAGG CAGTCGGCGA TCACATCGAC
ATCGGCGTCG ACTTCCGGGG GCGCGTCTCG AAGTCGATGG CGAAGACGCT GACCCACCGC
CTCAGCGATC TCGGCCTGAT GTTCATCGAG GAGCCGGTGT TGCCCGAGAA CGTCGAGCAC
CTGCCGGCGA TCGCCGCCCA GACCCGCGCC CCGATCGCCG CGGGCGAACG GCTCTACTCC
CGGTGGGACT TCAAACGGCT GTTCGACACG GGAGCGATCG ACGTGATCCA GCCGGACGTG
TCCCACGCAG GAGGGATCTC CGAGATGGTC AAGATCGCAA ACACCGCCGA GACTCACGAC
GTGGCAGTCG CACCCAACTG TCCGCTGGGC CCGATCGCAC TGGCGGCCTC GCTGCAGGTC
GACACCTACG TCCCGAACTT CTTCGTGCAG GATCACGGCT TCGACATCCA TCTCCCCGCG
TCCGACCGGA CCCACCAGTA CGTCACGGAC GATCCGTTCG TGTTCGACGA CGGCTACGTC
GAAGTGTTGG ACGATCCTGG ACTGGGGGTC AACATCGATC GATCGCTCGT CGAGGAGCGT
GCCGAGGCCA ACGTCGACTG GCACAATCCG ATCTGGCGAC ACGAGGACGG GAGTATCGCC
GACTGGTAA
|
|---|
| Protein sequence | MEITDYELYG VPPRWLFLRL ETDEGVTGWG EPVVEGRAET VRAAVEEIMD SYLLGKDPRR
IEDHWQAMYR GSFYRGGPIL MSAIAGIDQA LWDIKGKQYG LPVHELLGGR SRDKIRVYQW
VGGNRPEELA AEADQLVDAG YTALKMDATH QMRHIESRET IEEIVDRVEH VREAVGDHID
IGVDFRGRVS KSMAKTLTHR LSDLGLMFIE EPVLPENVEH LPAIAAQTRA PIAAGERLYS
RWDFKRLFDT GAIDVIQPDV SHAGGISEMV KIANTAETHD VAVAPNCPLG PIALAASLQV
DTYVPNFFVQ DHGFDIHLPA SDRTHQYVTD DPFVFDDGYV EVLDDPGLGV NIDRSLVEER
AEANVDWHNP IWRHEDGSIA DW
|
|---|
| |