Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hmuk_0059 |
Symbol | |
ID | 8409556 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halomicrobium mukohataei DSM 12286 |
Kingdom | Archaea |
Replicon accession | NC_013202 |
Strand | - |
Start bp | 59278 |
End bp | 59898 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 645018397 |
Product | IS240-type transposase (ISH102) |
Protein accession | YP_003175917 |
Protein GI | 257386144 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3316] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.0254142 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.2099 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGAAA ACGACCGCCT CATCGGGAAT TTAGACGAAA TCAACTTAGA GCTTGTTGAA CGAGAAGCGA CACCCCGATT TCTGATGAAA TTCAGTATTC AGTTGTATCT CGCCGGATTG TCGCTTTCGA ATACTGTTTC TGCTCTTGAG ATAGTTGGTG TCGAACGTGC TCGATCCACC GTTCATAACT GGGTTCACAA GGCCGAGCTA CAGCCGGAGT CTGGTCGATC TCCGGATCAA ATCGCGGTTG ACGAAACGGT GATCCGAATC GATGACGAGC AGTATTGGCT GTACGCCGCC GTCGATCCAG ATTCAAACGA ACTGCTCTAT ACACAGCTTG AGACGACGCG TACGACCGCT ATTTCTCACG CATTCTCTGC CGAACTGCGC GAGAAACACC ACGTCGACGA CGCCGTGTTT CTCGTAGACG GTGCGACTCC GTTGGAAGAC GCGTGTTCAC GTTATCGTCT CGATTTCAGA TACCAAAAAC ATGGAACTCG GAACGGTGTC GAACGCATCT TTCGGGTGGT GAAGCGACGA ACCTCTTCGT CCTCAAACCG TTTCAGCCAC GTCGACCCAG ACACAGCTGA CGACTGGCTC AGAACGTTCA GCTTCGCATG A
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Protein sequence | MPENDRLIGN LDEINLELVE REATPRFLMK FSIQLYLAGL SLSNTVSALE IVGVERARST VHNWVHKAEL QPESGRSPDQ IAVDETVIRI DDEQYWLYAA VDPDSNELLY TQLETTRTTA ISHAFSAELR EKHHVDDAVF LVDGATPLED ACSRYRLDFR YQKHGTRNGV ERIFRVVKRR TSSSSNRFSH VDPDTADDWL RTFSFA
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