Gene Hmuk_0056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_0056 
Symbol 
ID8409553 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp56517 
End bp58259 
Gene Length1743 bp 
Protein Length580 aa 
Translation table11 
GC content69% 
IMG OID645018394 
Productputative sodium/phosphate symporter 
Protein accessionYP_003175914 
Protein GI257386141 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.283904 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.521424 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCCG CTGGCCGCAG ACGACGATAC GCGCTGCTCG TCGGGGCGGT CTTTGCCGTC 
GCACTCGCCG CGCGGCTTGG TACCCTCCAC TGGAGTCCGC TGCCGTCGAC GCTGGACGGA
TTTCTGTACG TCTGGCGTGC CCAAGAGACG ATCCAGACCG GGGCGTTCCC GCTCGACCGG
TTCCGGGCCG ACAGCTTCGT GTTCACGACG CTCGTGACGA CGGCCGGACT GATCACCGGG
GAGCAGCCCC TTCACGTCAT CCAGCCGGTC GTGGCGATCA CCGGTGGAGC GTCCTGTCTC
ACCGCGCTGG CACTGGCCCG TCGTCTGGGC TGGCGCTTGG GCTGGGATCC AGGGCGGACC
GCCCTCACCG CCGGAATCGC TGGGTTCGGA CTCGCGGTGT CGGGCTTCTA CGTTCGCCGC
AGCGGGACCG CCGACGAGGA GGCCCTGGCG TTTCTGCTGG TGCCGCTGTT CGCGATCGCC
GTGCACCGAC TGTTCACGCG AGACCGACGA ACCGGCCGCT GGCTCGCCGT GAGCGCCCTC
TTTTTCGTCA CGTTCCCGCT CCTGCACACG TTCAGTTCGC TCGTGGCGGG ACTCGTGGTG
ACGGGGATCC TCGGCGCGTA CCTCGCCAGC GTCCCCTCCC GGCGCGGCGT CGCGGCGGCG
GGCCTGCTGA TCGCCGGCTT CTGGACCTAT CTCTGGGGCT ACTACGAGGT CGCCGAACGC
CTCGGCCTGT TCGTGCCGTA CGTGAACCGA GTGACGGCGT ATCCGGGGCT CTTCCTCGCG
TGGCTGATCG TCCTCACCGT GGGCGTCGCG TGGCTACAGC GAAGCGGCGC GACCCCGCAA
CGGGCCGGCA TCGGGACGGC GATCGGCCTG TGGTTCGTCG CCCTCGCTGC GAACGTGGGC
CAGTCCGTCT TTCCGGGCAC GCAGACGACG CCGACGCTCC TGCTCGTTGC GGTCGCCGCC
TTCGCCGTCC CGTTCCTGTT CGCGCTCGTC GGACTCCCGG CGGTGAGCTG GGAGCGGGAC
GAGAGCGGTC CTGTCGTCCT CGGTCTCCTG CTCGGTCCGA TCGTGGTCGT GTACTTCTCG
CTTACCGCCG CGCTCACGCC CGAGTACTTC GACACCGCTA TGCGCGGGCA CGTGTTCGTC
TACTTCCCGG TGTTCGTCCT CGCCGCGGTC GGCGTCGGCA CGCTCGCCGT TCGCGGCCGT
CGTCACGGGA CAGAGGCGGC GAGCGAAGCG GGCACACCGG TGGCGAGCGA TGGGGGCACG
GGACGCAGTC GCGGAACGAC CGTCGCTCTC GTGGCGATCG TGCTCGTCAG CGCGCTCGTC
ACGCTCCCGG TCGCGTTCGT CCACCTGGAC ACGCTCGATG CACCCGCCGT GACCACGGAG
TCGGAGTTCG CGGCGGTGAC GTTCACCGCC CAGCGCTCGA CCGGACCGTG GGCGACGGAC
CACTCGCTCA GTCGAGTCGC CGTCCACACC TACCCGGACG CGCCCAAGGC GTCCTATCAG
CCGGTCGTGG CGTGGTTACA GGGCGGGGAG CAGCCGGAGT GTCCGACGCT GGCACAGGAT
ACGTGGGCGA CCTCGGGTGC ACACCTCTTC CCAGCTCCGG CGGAACGCAC CTCGCCGAGG
GCCTACGAGA GCTGGCAGTC TCGCAACGAG GTCGTCTATT CGACTGCGGG GCTCGACGCG
ACCGTGCTCG TGCGTCCGCG GAGCGTGGGG ACGAACGAGA GTGGCTGCTA TAGTAACAAT
TGA
 
Protein sequence
MNAAGRRRRY ALLVGAVFAV ALAARLGTLH WSPLPSTLDG FLYVWRAQET IQTGAFPLDR 
FRADSFVFTT LVTTAGLITG EQPLHVIQPV VAITGGASCL TALALARRLG WRLGWDPGRT
ALTAGIAGFG LAVSGFYVRR SGTADEEALA FLLVPLFAIA VHRLFTRDRR TGRWLAVSAL
FFVTFPLLHT FSSLVAGLVV TGILGAYLAS VPSRRGVAAA GLLIAGFWTY LWGYYEVAER
LGLFVPYVNR VTAYPGLFLA WLIVLTVGVA WLQRSGATPQ RAGIGTAIGL WFVALAANVG
QSVFPGTQTT PTLLLVAVAA FAVPFLFALV GLPAVSWERD ESGPVVLGLL LGPIVVVYFS
LTAALTPEYF DTAMRGHVFV YFPVFVLAAV GVGTLAVRGR RHGTEAASEA GTPVASDGGT
GRSRGTTVAL VAIVLVSALV TLPVAFVHLD TLDAPAVTTE SEFAAVTFTA QRSTGPWATD
HSLSRVAVHT YPDAPKASYQ PVVAWLQGGE QPECPTLAQD TWATSGAHLF PAPAERTSPR
AYESWQSRNE VVYSTAGLDA TVLVRPRSVG TNESGCYSNN