Gene Hmuk_0055 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_0055 
Symbol 
ID8409552 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp54328 
End bp56388 
Gene Length2061 bp 
Protein Length686 aa 
Translation table11 
GC content60% 
IMG OID645018393 
Producthypothetical protein 
Protein accessionYP_003175913 
Protein GI257386140 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.48111 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.381325 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAACGC TTATATCATT TCCACTGGTC GATATGCTAA GGATCCGATA TATGAATGGG 
GCAATTTCAG ATGGCCAGCA GACCGTCCTA GCGATCGTGC TGACCGTGCT AATGCTCGGT
GCGCCGATCG CCGGGGCCGT GTCTGCGGAG TCACTGGACG ACTACGTCAG CGGTTCCGAT
GTCGAACAAT CAGCGTCCGC TCAGTTCGAG CGAACGGCAC CGACGCCGTC GATCATGGTC
ACGTCCGGCC AGACACCCGG ATCGGGCGGC GTCTCGGCCA AGATTGACGA TGAGGGTTAT
ATCGTCAATC CGGACGATAC CATTTCAGTC CACGCGTTCG CTCCTGCGCG CTTGCGGCCC
AACGAGAACA CAAAATCGTT AGCACCAACG TCGGTCCAGA GTGCTGATGT GACCGCGACA
GCTCGTTCTG ACGGTTGGGA AACCGAACTT GATCTCCAGA AAGAAGAGCT GAATGTCTAC
AACAAAAACA CCGAGATTGA GTACAAATTC ACGTCGCAGA TGGGTGTTAG CGGAGACGGT
GACGACTATC AGCTCGTCGC TGCCCGCCTC GGAGCGGACG TGTCTCGTCC AGAATCGGTT
GACGAGTTAC CGTCGCTGCT GACGGACAAC CCGAACGTCG AAGCCGAAGT TGTCGACACG
TACCGCGATC AGGATGAGCC GATCCTTGAT GAGGAGGCGG TCGTGTATGA GCCTTCGAAG
TCCGGTCGCT ACGTGGTCGG CCTCGTTCAG ATCGAGGACA GTGCTGATAC CGATCGCACC
GGATTCCAGC AAAAAGGGAA TGGAGACGGT AACATCGAGG CGAAAGACGA AGTGACGATC
ATCGGTGCGG ACAGCCTGCT CGTTCAGGAG GGCGAAAGCT CGATCAACGC CCCGTCGAGC
ATCGCGCCGG GCAGTACGCG AACCCTCTCG GTCGACGCCG GTGAGGACCT CAAGAGTATC
CAGGACGGGA AGGACGTCAG CCACACCGTC TTGCTGATCA ACGAGGACAG ACTGAGTCAA
CAGAGCATTC ACGCTACCGG AAACGAAGAC GATTTGATCA CGTCGGTCGA TTCATCGATC
GAAGAGGTCA AAGCCGACAC CGATCTCTCC AGCGGTGCCG AGCCGTTCGG TACGTCGATC
GGCACCAGCG AGACCAGCGA CACGATCGAC GTGACGACGC TTCTGGAGGA CGTTGTCGAT
CCCGACAAAG TCACCACCGA CGGTGGCGAG ACCCTCTACG CAGCCGTCGG ATCGACCGTC
GGCGACGCCA AAGACGAGGT GACGATCACC GTTCCGGAGG GAACTCCGCC GGACACGTAC
ACGCTCGTCC ACGTCGCGAC GATCGACGGG GAGACGCGCT CCTCGACGAC CACGATCAAG
CGACAGGTCG GTGAACCAAA CATGAAGGTC TCGCCGAGCG ATACGATCGA CTTCGGCAAG
GTCACACGCG GGAACGACCG CACCAAGGAG TTCACGATCG AAAACACCGG GACCGCCGAG
CTGACGGTTA CCGACATCAC CACGAGTGGA AGTTACAGCG AGTCGTTCAC TGTGGGAGAG
ACCTTCCACA AGATCGGAGC CGGCAACTCG AAGACGGTCC ACCTCACCTT CGACAACGCC
AAGAGCTTCG ACAACGGTGA GTTGACCATC GAGACGGCCC ACGGAACGAC GAAGACGATC
ACCATCGAAG CCACCGTCAC GAGGCGCAGC GACGACGGTG ACGATGACGA CGATGACGAC
GATAGCGACA ACGACGACGA CGATCCGACG GACACGCCGA CGGACACGCC GACGGACGAG
CCGGACACGC CGACGGACGA ACCGGATACG CCGACGGACG AGCCGGACAC GCCGACGGAC
GAGCCGGACA CGCCGACGGA CGAACCGGAT ACGCCGACGG ACGAGCCGGA CACGCCGACG
GACGAGCCGG ACACGCCGAC GGACGACGAC GACGACGATG ACGATGACGA CACGACCACG
GGAGACGGTC CCGGCTTCAC GCCCGTGATG GTGCTGATTG CACTGGTCGC GACGCTGGCC
ATCCTCAGAC GGCGAGCCTG A
 
Protein sequence
MITLISFPLV DMLRIRYMNG AISDGQQTVL AIVLTVLMLG APIAGAVSAE SLDDYVSGSD 
VEQSASAQFE RTAPTPSIMV TSGQTPGSGG VSAKIDDEGY IVNPDDTISV HAFAPARLRP
NENTKSLAPT SVQSADVTAT ARSDGWETEL DLQKEELNVY NKNTEIEYKF TSQMGVSGDG
DDYQLVAARL GADVSRPESV DELPSLLTDN PNVEAEVVDT YRDQDEPILD EEAVVYEPSK
SGRYVVGLVQ IEDSADTDRT GFQQKGNGDG NIEAKDEVTI IGADSLLVQE GESSINAPSS
IAPGSTRTLS VDAGEDLKSI QDGKDVSHTV LLINEDRLSQ QSIHATGNED DLITSVDSSI
EEVKADTDLS SGAEPFGTSI GTSETSDTID VTTLLEDVVD PDKVTTDGGE TLYAAVGSTV
GDAKDEVTIT VPEGTPPDTY TLVHVATIDG ETRSSTTTIK RQVGEPNMKV SPSDTIDFGK
VTRGNDRTKE FTIENTGTAE LTVTDITTSG SYSESFTVGE TFHKIGAGNS KTVHLTFDNA
KSFDNGELTI ETAHGTTKTI TIEATVTRRS DDGDDDDDDD DSDNDDDDPT DTPTDTPTDE
PDTPTDEPDT PTDEPDTPTD EPDTPTDEPD TPTDEPDTPT DEPDTPTDDD DDDDDDDTTT
GDGPGFTPVM VLIALVATLA ILRRRA