| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hmuk_0052 |
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| Symbol | |
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| ID | 8409549 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halomicrobium mukohataei DSM 12286 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013202 |
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| Strand | + |
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| Start bp | 50191 |
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| End bp | 51924 |
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| Gene Length | 1734 bp |
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| Protein Length | 577 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 645018390 |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_003175910 |
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| Protein GI | 257386137 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.316768 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACGA ACACACTCAC GACCCTAGAG AACGTCGACC GCGAATGGTG GAAAGAGGCC
GTCGTCTACC AGATCTATCC ACGAAGCTTC AGCGACACCG ACGGGGACGG CGTGGGCGAC
TTACAGGGTA TCGTCGACAA GGTCGACTAC ATCGACTCGC TGGGCGTCGA TCTCGTCTGG
CTCTGCCCGG TCTATGGCTC GCCCAACGAG GACAACGGCT ACGACATCAG CGACTACCAC
GCGATCATGG ACGAGTTCGG CGACATGGCC GACTGGGAGC GCCTGCTCGA CGAGCTCCAC
GACCGAGATA TTCGGCTGAT CATGGACCTC GTCCTGAACC ATACCTCGAG CGAACACGAG
TGGTTCCAGC GCTCGCGCCG TGGCGAGGGC GAGTACGCCG ATTACTACTA CTGGCGCGAC
GGCCGCCCAG CCACCGACGC CGACTACGAC ACCGACGACG GCCCCGCCGA CGAGGTCGCC
CCCAACAACT GGGACTCGAT CTTCGGCGGG CCCGCCTGGA GCTACGTCGA GGAGCGCGAG
CAGTGGTACC TCCACCTCTT CGACGAGAAC CAGCCGGACC TCAACTGGCG AAACCCGACC
GTCCGTCAGG CGATGAAAGA CGTGGTCTCG TGGTGGCTCG ACCGCGGGAT CGACGGCTTC
CGCATGGACG CCGTGTCCCA CATGTCCAAG ACCGACGGCC TCCCGGACGG CGATCCCGAG
GGCACGCCCA CCGGGATCGA ACACTTCAGT CACGGCCCGC GGCTGGAGGA GTACCTGACC
GAGTTGTCGG CGGACGTGCT CTCGGACCAC GACATCACGA CCGTCGCGGA GATGGGCCAC
ACCTTGATCG AACAGGCCGC CGACTACCTC GACGACGAGG CCATCGGGCT GGACATGATA
TTCCAGTTCA GCCACATGGG CGTCGACGGC GGCTGGGACC CCGAGACCGT CGGCGAGTGG
GACCTCCCCG AGTTCAAACG GATCATGTCC GAGCGCCAGG ACGCGCTCGC GGACCGTGGC
TGGGACGCCC TCTTCCTGGG CAACCACGAC CAGCCCCGGA TCGTCTCTCG CTTTGGGGAC
GAAGCCTACC ACCGCGAGTC GGCCTCGCTG ATCGGGACCT TCCTGTTGAC GATGCGAGGG
ACCCCCTACG TCTACCAGGG CGAGGAGATC GGCATGACTA ACGCGGACTT CGAGAGCCTC
GACGAGATCG ACGACCCACA GACGGTCGGT CGCGTCGAAC AGTACATCGC CGACGGCGTC
GCGGACTCCT ACGAGGAGCT TCGCGAGGTC GTCAACGCAC GGAGTCGCGA TCACGCCCGG
ACGCCGATGC AGTGGTCCGA CGAGCCAGGT GCCGGCTTCA CCGACGGCGA GCCCTGGCTC
AAGTGCAACG CCGACTACAC CGAGATCAAC GTCGCCGCCC AGCGAGACGA TCCGGCGTCG
GTACTGAACC AGTACCGACG ACTGATCGAC CTCCGCCAGT CGACGGACGT GCTTGTCTAC
GGCGACTACG AACTGCTCGC GCCCGAGGAC GACCAGCTGT ATGCCTACAC GCGCACCCTC
GACGACGAAC GGGCACTCGT GGTGCTGAAC TGGTCGAGCG AGCCGGCGAC GTTCGAGGGC
AGCGAGATCG AGGTCGACGA TCCGACAGTA CTGTACGGGA ACTACGACGA CGCGCCGACC
GAGCCCACCA ATGTGTCGCT TCGGCCGTGG GAAGCAGTCG TCTACCGACT GTAG
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| Protein sequence | MSTNTLTTLE NVDREWWKEA VVYQIYPRSF SDTDGDGVGD LQGIVDKVDY IDSLGVDLVW
LCPVYGSPNE DNGYDISDYH AIMDEFGDMA DWERLLDELH DRDIRLIMDL VLNHTSSEHE
WFQRSRRGEG EYADYYYWRD GRPATDADYD TDDGPADEVA PNNWDSIFGG PAWSYVEERE
QWYLHLFDEN QPDLNWRNPT VRQAMKDVVS WWLDRGIDGF RMDAVSHMSK TDGLPDGDPE
GTPTGIEHFS HGPRLEEYLT ELSADVLSDH DITTVAEMGH TLIEQAADYL DDEAIGLDMI
FQFSHMGVDG GWDPETVGEW DLPEFKRIMS ERQDALADRG WDALFLGNHD QPRIVSRFGD
EAYHRESASL IGTFLLTMRG TPYVYQGEEI GMTNADFESL DEIDDPQTVG RVEQYIADGV
ADSYEELREV VNARSRDHAR TPMQWSDEPG AGFTDGEPWL KCNADYTEIN VAAQRDDPAS
VLNQYRRLID LRQSTDVLVY GDYELLAPED DQLYAYTRTL DDERALVVLN WSSEPATFEG
SEIEVDDPTV LYGNYDDAPT EPTNVSLRPW EAVVYRL
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