| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hmuk_0051 |
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| Symbol | |
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| ID | 8409548 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halomicrobium mukohataei DSM 12286 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013202 |
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| Strand | + |
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| Start bp | 48422 |
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| End bp | 50194 |
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| Gene Length | 1773 bp |
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| Protein Length | 590 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 645018389 |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_003175909 |
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| Protein GI | 257386136 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.237414 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGAGA CAGTCGAGCG GACGCGATCC GACCGCCAGT GGTGGGAAGA GGCCGTCGTC
TACCAGATCT ACCCGAAGAG TTTCTTCGAC AGCGACGGCG ACGGGATCGG TGACCTCGCG
GGCATCACCG AGAAGGTCGA CTACCTCGAC GCGCTCGGGG TCGACGCGGT CTGGCTCTGT
CCCGTCTACG ACTCGCCACA GGCCGACAAC GGCTACGACA TCCGCGACTA CCGGTCGATC
TTCGACACCT ACGGCGACAT GGCCGACTGG GAGCGCCTGC TGGCCGAACT CCACGACCGA
AATATTCGGC TGGTCATGGA CCTCGTCGTC AACCATACAT CGGCCGAACA CGAGTGGTTC
CAGCACTCGC GCCGTGGCGA GAGCGAGTAC GCCGACTACT ACCACTGGCG CGACGGCCGC
CCGGCTGAGA CGGCCGACTA CGACACCGAC GACGGTCCCG CCGACGAGGT CGCCCCCAAC
AACTGGGACT CGATCTTCGG CGGCCCGGCG TGGGCCTACG ACGAGGAGCG CGGACAGTGG
TACCTCCACC TCTTCGACGA GAGCCAGCCG GACCTCAACT GGGAGAACGA GGCCGTCCGC
GAGGACGTGT ACGAGATGAT GCGCTGGTGG CTCGACCGCG GGATCGACGG CTTCCGCATG
GACGTAATCA ACCTCGTCTC GAAGACGCCG GGGCTCCCCG ACGGCGACCC GGAGAGTGGG
CTCGTCGGTG CAGAGCACTT CATGAACGGG CCCAAAGTCC ACGATTACCT CTCGGAGCTG
GTCGCCGAAG CCATCCCGGA CGACGAGATC CTCACCGTCG GCGAGACGCC GGGAGCGGGC
GTCGAGGACG CCCAGCGGTT CGTCGGCGAG GACGGCCTCT CGATGGTGTT CCAGTTCGAA
CACGTCAACG TCGGCCACGA GGGCGACAAG TGGTCGCTGG AGGACTACTC GCTGGTCGAA
CTCAAAGAGA GTCTCGCACG CTGGCAGAAC GGTCTGGCCG ACGAGGGGTG GAACAGCCTC
TACCTGAGCA ACCACGACCA GCCACGGACC GTCTCCCGGT TCGGCGACGA CGGGCGGTAC
CGTCGCCGCT CCGCGAAGCT GTTCGGGACG CTGCTGTACA CCCTCCAGGG AACGCCGTTC
GTCTACCAGG GCCAGGAGAT CGGCATGACC AACGCCCCCT TCGAGTCGAA GTCAGAGCTG
CGGGACGTGG AGTCGATCAA CTTCGTCGAG GAAGCCATCG AGAGCGGCGC GGCCGAGAGC
TACGAGGACG TACGCGACGC CGTCGAGACC GTCGGCCGCG ACAACGCCCG GACGCCGATG
CAGTGGTCCG ACGACGAGAA CGCCGGCTTC ACCGACGGCG AGCCCTGGCT CAAGGTCAAC
CCCAACTACG ACGCGATCAA CGTCGAGCGG GCACGCGCCG ACCCCGATTC GGTGTGGCAC
TACTACCGCG AACTCGGCGA TCTTCGGGGG AATCGGGACC TGCTGGTCTA CGGCGACTTC
GAGCTGCTCG CGCCCGGGGA CGAGCAGGTG TTCGCCTACA CCCGGACGCT GGGCGACGAA
CGGGCCCTCG TTGTCCTCAA CGTCTCCGCC GAGCCCGCGA CGTTCGCGGT GCCCGACGAC
GCTGGCGACG ACCTCGAACT CGCCATTGGG AACCTGAACG CCCTCGAAAC GCCCGGCAGC
ACCGTCGAAC TCGATCCCTA CGAGGCGCGC GTCTATCTGA CGCCCGCGAC CGACACTGAC
CGACCGACGA CCACGAACTC CGATTCGACA TGA
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| Protein sequence | MSETVERTRS DRQWWEEAVV YQIYPKSFFD SDGDGIGDLA GITEKVDYLD ALGVDAVWLC
PVYDSPQADN GYDIRDYRSI FDTYGDMADW ERLLAELHDR NIRLVMDLVV NHTSAEHEWF
QHSRRGESEY ADYYHWRDGR PAETADYDTD DGPADEVAPN NWDSIFGGPA WAYDEERGQW
YLHLFDESQP DLNWENEAVR EDVYEMMRWW LDRGIDGFRM DVINLVSKTP GLPDGDPESG
LVGAEHFMNG PKVHDYLSEL VAEAIPDDEI LTVGETPGAG VEDAQRFVGE DGLSMVFQFE
HVNVGHEGDK WSLEDYSLVE LKESLARWQN GLADEGWNSL YLSNHDQPRT VSRFGDDGRY
RRRSAKLFGT LLYTLQGTPF VYQGQEIGMT NAPFESKSEL RDVESINFVE EAIESGAAES
YEDVRDAVET VGRDNARTPM QWSDDENAGF TDGEPWLKVN PNYDAINVER ARADPDSVWH
YYRELGDLRG NRDLLVYGDF ELLAPGDEQV FAYTRTLGDE RALVVLNVSA EPATFAVPDD
AGDDLELAIG NLNALETPGS TVELDPYEAR VYLTPATDTD RPTTTNSDST
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