| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hmuk_0050 |
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| Symbol | |
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| ID | 8409547 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halomicrobium mukohataei DSM 12286 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013202 |
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| Strand | - |
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| Start bp | 46154 |
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| End bp | 48040 |
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| Gene Length | 1887 bp |
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| Protein Length | 628 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 645018388 |
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| Product | extracellular solute-binding protein family 5 |
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| Protein accession | YP_003175908 |
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| Protein GI | 257386135 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.600017 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.630489 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGAATA ATCATACCGA TCACGAGCAC CAGTCGATAC TATCTCGCCG CCGTTTCGTC
AGCGGCGTCA GCCTGGCCGG CATCGCCGGC CTCGCGGGCT GTGGCGGACA GCAGGCCGAG
CAGACGGCGA CCGAGACGTC CGGCGACGGC GGCGACGAGA CCGACGCGGG CGATACTGAC
ACCGAGACCG AAACGGAGGT CCAGGCCACT AGCGAGGCCC AGCGCAAGAT TCAGGAGCTG
GCCTACATCA CGAACCAGAC GCTCCCGGTG TTGCCGGTCA TGGAGAAACT CGCCCAGTCG
TTCCAGTCGA CCGACGACTG GAACGTGCCC GGGACCGACA GCGATGCGGT CCAGACCTAC
TGGCCCACAG AGTGGCTCCC GCGGGAGGGA CAGTGGACGG CGACGGACGA CTCCGACGAC
GACCGACTGA CCTTCGCACA GTGGGCCGTT CCCCAGGACT CACAGTACAA CCCCTGGAAC
GGGCAAAACT ACGGCGAAGC CCGTCGTCTG ATGTTCGATC GGTTCATGAA GTACAACCTC
GCGACCCAGG AGTACACCGG CTACGCCATC CAGGACTGGG AGGTCGGCGA GGAGACGGTC
TCGCTCACCG TCCGCGAGGG GCTGACCTGG CACAACGGCG ACGCCGTCAC CGCGACGGAC
GTGGCCAACC AGGTCAAACT CGACATCTAC AACGGCGGTT CGCTGGGTAA CTTCGTCGCG
CCCGAGGACG TGGGCGCGGT GTCGGACCGG GTCACGGCGG TCGACGAGTC GACGGTCGAG
ATCACGCTGG CCGAACCCGC CAGCGAGACG ATCCTGCTGG CGTACCTCCA GCCAAAGCGG
CTCACCGCCC ACGACGGCTC CTACGGGGAG TTCGTCACCG CACTCGACGA GGCCGCCGGC
GAGGACGAGC GCGCGTCGGC GCTCAGCGAT CTCACCAACG ACACGACCCC CGAACCGGTC
GGCTGTGGCC CCTTCCAGTT CGAGGACGCC GACAGCCAGC GCACGCTGCT GACCAAGTAC
GAGGACCACC CGGACGCGGA CAACATCAAC GTCCCCGAGG CCGAGTACCT CTACAAGCCA
CAGAACCAGG GGCGCTGGAA CTCGCTGATC AACAACGAGA CCGACGGGTC CGCGACGCTG
TTCATGCCCC AGAACCGGCT CAACCAGCTG CCCGACTCGA TGCAGGTCAG TCTCATCCCG
CGTCACTGGG GGATGGGGCT GATGTTCAAC TTCGAGGAAG AGCCCGTCGA CGACGTTCGG
GTCCGCAAAG CGATCGCCCA CGTCGTCAAC CGCGAGAACG CGGCGCTCAA CTCCGGTGCG
GGCACCCAGT CCAAGCTCGC GGTCACCTAC CCCAGCGGAC TGACCGGCGA GTTCAACGAC
CAGATCGAGG GCGGCTGGCT CGACGGCGTC GCAGACGAGT TCGAGACCTA CGGCCCGGGC
GAGTCCCAGA CCGAAGCGGC CGCGTCGCTG CTTCGCGACG CCGGCTACGA GAAACAGAAC
GGCACCTGGC AGAAGGACGG CGAGCCCCTC GAACTCCCGA TCAAGGGGCC GTCGGGCTTC
TCGGACTGGG TGACCGGCGT CGAGACGATC GTCTCGAACC TCAAGGACTT CGGCATCGAG
GCCGAGTCAG TCATGCTCGA CAACTCCACG TACTGGGGGA GTGACTACTC CAACGGCGAC
TTCGTCGTCG GGCTCCAGGG GTGGGCCTCC TACGACCACT CGTACCCGTA CTTCCACTTC
GACTGGATCT TCAACAGCTG GGACGCCAAG AACGCCTGGA ACCTCCCAAG CGAGTTCGAA
TCGCCGATCC TCCACGACGA TGAGCGCGAC GGCGAGACCG TCACGCCCGT CGACATCGTC
GACGAGCTGT CGACGGCCAA CCAGTAG
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| Protein sequence | MANNHTDHEH QSILSRRRFV SGVSLAGIAG LAGCGGQQAE QTATETSGDG GDETDAGDTD
TETETEVQAT SEAQRKIQEL AYITNQTLPV LPVMEKLAQS FQSTDDWNVP GTDSDAVQTY
WPTEWLPREG QWTATDDSDD DRLTFAQWAV PQDSQYNPWN GQNYGEARRL MFDRFMKYNL
ATQEYTGYAI QDWEVGEETV SLTVREGLTW HNGDAVTATD VANQVKLDIY NGGSLGNFVA
PEDVGAVSDR VTAVDESTVE ITLAEPASET ILLAYLQPKR LTAHDGSYGE FVTALDEAAG
EDERASALSD LTNDTTPEPV GCGPFQFEDA DSQRTLLTKY EDHPDADNIN VPEAEYLYKP
QNQGRWNSLI NNETDGSATL FMPQNRLNQL PDSMQVSLIP RHWGMGLMFN FEEEPVDDVR
VRKAIAHVVN RENAALNSGA GTQSKLAVTY PSGLTGEFND QIEGGWLDGV ADEFETYGPG
ESQTEAAASL LRDAGYEKQN GTWQKDGEPL ELPIKGPSGF SDWVTGVETI VSNLKDFGIE
AESVMLDNST YWGSDYSNGD FVVGLQGWAS YDHSYPYFHF DWIFNSWDAK NAWNLPSEFE
SPILHDDERD GETVTPVDIV DELSTANQ
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