| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hmuk_0041 |
|---|
| Symbol | |
|---|
| ID | 8409538 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halomicrobium mukohataei DSM 12286 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013202 |
|---|
| Strand | - |
|---|
| Start bp | 37923 |
|---|
| End bp | 39281 |
|---|
| Gene Length | 1359 bp |
|---|
| Protein Length | 452 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 645018379 |
|---|
| Product | isochorismate synthase |
|---|
| Protein accession | YP_003175899 |
|---|
| Protein GI | 257386126 |
|---|
| COG category | [H] Coenzyme transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1169] Isochorismate synthase |
|---|
| TIGRFAM ID | [TIGR00543] isochorismate synthases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.124842 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAGAC AGGATGCGGC CGAGACCGAG CCGGCTTCGG TCGGTGCCGA AACGTACGTC
TCCGCGTCCC GACGAATCGA CGTGTCCCCG CTCGCTGCCG CCGGTGCCGT CCCCGACCGG
CGGCGATTCT GCTGGCTCCA CCCCGAGGAG CCGGACCTGC TCGCCGTCGG CGCGACAGCC
GCCGTGACGG TCGACAGCCC CGATCGATTC GAGACCGCAG ACGACCGCCT GACGGAGCTT
TTCGGAGCCG TCGACGGACC TGACGCCCCC GAGATCGCCG CCCCTCGCGC GGTCGGTGGG
TTCGCCTTCT TCGACGGCAA CACCGTGCCC GCCGACACAC AGAGCCACTG GCGTGACTTC
GACGACGGCA CGTTCGTCCT GCCGCGGGCC CAGATCGTCG CCGGAGACGA CGCGACCTGG
CTGACGGTCA CGGTTCCGGA AGACGAACAC TCCGAGCTGT CGAGCCAACT CGACGGCTGG
GCCGACCGGT TGACCGACGC TGGCACCCAC GACGGTACCG AGCCCGAGGC GACGGCGTTC
CACTGGTCGC TGTCCCGCGA GGAGTGGGAA CGGACCGTCG ACGACGTGAT CGGCCGCATC
GAGAGCGACG GACTCGACAA GGTCGTTCTC GCACAGGAAC TCACGGTCGA CCTCGACGCT
CCCGTTCCGG TCGCCCCGGT GCTCTCGCGC CTGCGCGAGA CGTACCCGAA CTGTACGACG
TTCTGTTTCT CCCCGACGCC GGGGCGGACG TTCTTCGGTG CGACCCCCGA GACGCTGGTC
GCGCTGGCGG ACGGCCACGT CCAGACGGAG GCACTGGCGG GGACGACCGA CCGGGGCGAG
ACCGCCGCCG AGGACACCGA TCTGGCCGAC GCGATGCTGG GCGACGAGAA GTACCAGGTC
GAGAACCGCA TCGTCGCCGA CACGATCGCC GACGCGTTGC GCCCGGTCGC CGACGACGTG
ACCGTCGCCG AACCGTCGAT CAAGCGCATC ACGAACCTCC AGCACCTCCA CCGCCCGATC
ACGGCCACGG TCCCGAGCGA GACGAGCGTG CTCTCGCTGG CCGAGCGTCT CCACCCGACG
CCGGCAGTCG GTGGGTCGCC CCGACGCGCG GCCAGCGACG TGATCCGCGA CGTCGAGCCG
TTCGATCGGG GCTGGTACGC CTCGCCGGTC GGCTGGGTCG ACGGCGACGG CGACGGCACC
TTCGTCGTCG GGATCCGTGC GGGGCTGACG TGGGACGAAC GGCTCGCGCT GTACGGCGGC
GCGGGCATCG TCACGGGCAG CGACCCGACG ACGGAGTACG GCGAGGTACG GTCGCGGTTC
GAACCGATTC TGGACGCGCT CGAAGTCGAG TTGCCGTAG
|
|---|
| Protein sequence | MSRQDAAETE PASVGAETYV SASRRIDVSP LAAAGAVPDR RRFCWLHPEE PDLLAVGATA
AVTVDSPDRF ETADDRLTEL FGAVDGPDAP EIAAPRAVGG FAFFDGNTVP ADTQSHWRDF
DDGTFVLPRA QIVAGDDATW LTVTVPEDEH SELSSQLDGW ADRLTDAGTH DGTEPEATAF
HWSLSREEWE RTVDDVIGRI ESDGLDKVVL AQELTVDLDA PVPVAPVLSR LRETYPNCTT
FCFSPTPGRT FFGATPETLV ALADGHVQTE ALAGTTDRGE TAAEDTDLAD AMLGDEKYQV
ENRIVADTIA DALRPVADDV TVAEPSIKRI TNLQHLHRPI TATVPSETSV LSLAERLHPT
PAVGGSPRRA ASDVIRDVEP FDRGWYASPV GWVDGDGDGT FVVGIRAGLT WDERLALYGG
AGIVTGSDPT TEYGEVRSRF EPILDALEVE LP
|
|---|
| |