Gene Hmuk_0038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_0038 
Symbol 
ID8409535 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp34396 
End bp36381 
Gene Length1986 bp 
Protein Length661 aa 
Translation table11 
GC content73% 
IMG OID645018376 
Product5-oxoprolinase (ATP-hydrolyzing) 
Protein accessionYP_003175896 
Protein GI257386123 
COG category[E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0145] N-methylhydantoinase A/acetone carboxylase, beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGAGA CGCTGCTGGG GGTCGACGTG GGCGGCACCT TCACGGACGT GGTTGTCGTC 
GCCGACGGAC GGCTGACGAC GGCGAAAGTA CCCACGACGG CAGATCAGAG CGAGGGCGTA
CTCGACGGCG TCGAACGCGC CTGCGACCGG GCCGGCGTCG AGATGACCGC TGTCGACCGC
TTTCGCCACG CCACGACCGT CGCGGTCAAC GCCATGCTCG AACGGTCGGG AGCGACGACG
GCACTGGTCA CGACCGAGGG CTTCGCCGAC GTGCTCGCGA TCGGCCGACA GGACCGTCCC
AGTCTCTACG ATCTGGACGC GCGAGGACCG ACGCCGCTCG TCCCCGCAGC GCGGCGCTAC
GAACTCGACG AACGTGCGAC GACCGACGGC GTCGAGCGGC CGGTCGATCC CGACGAGGTG
CGGGCGCTGG CCGCGGAGAT CGACGCCGAC GCGGTCGCGG TCGCCTTCCT CCACGCGTAC
GCTCACCCGG ACAACGAGCG GCGTGTGGCG GCGATCCTCC GGTCCGAACT CGACGTGCCC
GTCTCGGCCA GCCACGAGGT GCTGTCCGAG TTCCGCGAGT ACGAACGCAC GGCCACGACC
GTCGCCGACG CCGTCCTCAC GCCGGTCGTC GACGACTACC TCGATCGGCT CGCGGAGCGG
GCGGCCGACC GCGGGCTCCC GGCACCACGG GTCATGCAGG CAAACGGCGG CATCGCCGAT
CCGGCCACGG TCCGCGAGCG AGCGGTGACG ACCGTCATGT CCGGACCCGC TGCGGGCGTC
GTCGGTGCCG CCGCCTTCGA GCCCGACGAC GCCGACGGCG TGATCACGTT CGACATGGGC
GGGACCTCAA GCGACGTGTC GCTGGTCCGG GACGGCTCGG TCGAGCGGAC GACCGAGGCG
GCCGTCGGCG GTCACCCGAT CCGGATCCCG ATGGTCGACG TCGAGACCGT CGGCGCGGGC
GGGGGATCGA TCGCCGGCGT CGACGCCGGG GGTGCGCTCC GCGTCGGCCC GGCGTCGGCC
GGTGCCGACC CCGGTCCAGC CTGCTACGGC CGGGGCGGGA CCGAACCGAC GGTGACCGAC
GCCGCGCTCG TGCTGGGGTA TCTCGGCCCC GACACGACGC TCGGTGCCGA CCTCGGTCTC
GACGCCGACG CTGCCGTGGC CGCGCTGGAC GATCTCGCGA CGGCGGCGGA CCTCGACGGC
CCGGTCGACG CGGCGCGGGG AGTCTTCCGG GTCGCCAACG CGACGATGAC GCGAGCGATC
CGCGGCGTGA CGACCGAGCG CGGACACGAC CCTCGGCGGT TCGCGCTGGC CGCCTTCGGC
GGAGCCGGGC CGATGCACGC CGCCCCGCTG GCCGATCGAC TCGGCGTCGA TCGGGTGGTG
GTCCCGCGAG CCAGCGGCGT CCTCTCGGCG TTCGGGCTGC TGGCGGCGGC CGAGCACCAC
GACGCGGTCA GAACCCACCG GACGACGCTG GGCGACGCCA CGCGGGCGAC GATCGAGGAC
GTATACGAGG ACCTCCGCGG CCGCGTCCGT GCGGACGTGA GCGATCCCGA CGCGGCGACG
TATCGCCGGC AGGCGGACCT CCGCTACGTC GGCCAGAGCC ACGAACTCAC CGTCGACGTG
AGCGAGCCGT TCCGCCCCGC CGACCTGCGA GAGCGGTTCC ACGCGGCACA CGAGCGCGCG
CGGGACTACC GGCTCGACGA CGAACCCGTC GAGCTGGTCA ACTGCCGCGT CACGGCGACG
ATCGAGGGGA CGGCTCCGGA GCGATCCTTC GAAGGGGGCG GCGAGCCGCG GGTCGGGACC
CGCGAGGCGG TCTTCGGAGA CGGGCGTCGT GAGACGCCGA TCTACGACTG GCCGGCGCTG
GTACCGGAAC GGTCGATCGA CGGCCCCGCG ATCGTCGAGG GCGGCGAGAG CACCGTCGTC
TGCCCGCCGG GGTGGACGCT CGTCGCCGAC GACGAGGGGA CGATCCGCCT GGAGGGATCG
GCGTGA
 
Protein sequence
MDETLLGVDV GGTFTDVVVV ADGRLTTAKV PTTADQSEGV LDGVERACDR AGVEMTAVDR 
FRHATTVAVN AMLERSGATT ALVTTEGFAD VLAIGRQDRP SLYDLDARGP TPLVPAARRY
ELDERATTDG VERPVDPDEV RALAAEIDAD AVAVAFLHAY AHPDNERRVA AILRSELDVP
VSASHEVLSE FREYERTATT VADAVLTPVV DDYLDRLAER AADRGLPAPR VMQANGGIAD
PATVRERAVT TVMSGPAAGV VGAAAFEPDD ADGVITFDMG GTSSDVSLVR DGSVERTTEA
AVGGHPIRIP MVDVETVGAG GGSIAGVDAG GALRVGPASA GADPGPACYG RGGTEPTVTD
AALVLGYLGP DTTLGADLGL DADAAVAALD DLATAADLDG PVDAARGVFR VANATMTRAI
RGVTTERGHD PRRFALAAFG GAGPMHAAPL ADRLGVDRVV VPRASGVLSA FGLLAAAEHH
DAVRTHRTTL GDATRATIED VYEDLRGRVR ADVSDPDAAT YRRQADLRYV GQSHELTVDV
SEPFRPADLR ERFHAAHERA RDYRLDDEPV ELVNCRVTAT IEGTAPERSF EGGGEPRVGT
REAVFGDGRR ETPIYDWPAL VPERSIDGPA IVEGGESTVV CPPGWTLVAD DEGTIRLEGS
A