| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hmuk_0037 |
|---|
| Symbol | |
|---|
| ID | 8409534 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halomicrobium mukohataei DSM 12286 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013202 |
|---|
| Strand | - |
|---|
| Start bp | 32804 |
|---|
| End bp | 34399 |
|---|
| Gene Length | 1596 bp |
|---|
| Protein Length | 531 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 645018375 |
|---|
| Product | 5-oxoprolinase (ATP-hydrolyzing) |
|---|
| Protein accession | YP_003175895 |
|---|
| Protein GI | 257386122 |
|---|
| COG category | [E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0146] N-methylhydantoinase B/acetone carboxylase, alpha subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCGACG ACGCCGTCGA CGCCGTCGAC GCGGTCGAAC TGGAGATCCT CCGGAACCAA
CTGGAGAGCG TCGCAGAGGA GATGGGCGAG GTGCTGATTC GGGGTGCCTA CTCGCCCAAC
ATCACCGAGC GTCGGGACTG CTCGACCGCG CTGTTCGACG CCGACGGGCG GCTGGTCGCA
CAGGCCGAAC ACATCCCGGT CCACCTCGGG GCGATGCCCC GTGCCGTCGA CGCGATCCGG
GACCGGGATC CACGGCCCGG CGACGTGTTC GCGCTCAACG ACCCCTTCGC CGGTGGCACC
CACCTCCCGG ACGTGACCTT CGTCTCGCCG ATCGGGGCGG GAGCTGGTGG TCGGTCCCGG
TCCGGCGACC GACCTACCGG AGACGACGAT ATCGTGGCGT ACGCCGTCTC GCGGGCACAT
CACGCCGACG TGGGCGGGAT GGCTCCCGGC AGCATGCCCG CCGGGGCACG CGAGATCCAG
CAGGAGGGGC TGCGCGTGCC GCCGGTCCGG ATCGTCGCCG ACGGAACGGT GGTCGACGAC
GTGTTAGAGC TGGTGCTGGC GAACGTCCGC AACCCGGCCC AGCGCCGGGC CGACGTACAG
GCCCAACTGG CCGCCAACGA GCGCGGTGCC CGCCGGATCG GAGAGCTGCT CGACGACCAC
GGTGAGGGGC TGCTCGCGGC CTTCGACGCC GTCGTCGACT ACTCGCGAGC GCGGATGGAG
CGAGAGCTGT CGGCCCTCGA ACCGGGCACC TACGAGGCCG CCGGGACGAT CGAGGGCGAC
GGCGTGACCG ACACGGCGGT ACCGATCGAG GCGACCGTGA CCGTCGCGGA CGGCGCGGTG
ACGGTCGACT TCGAGGGGAC CGCCCCGCAG GTCGCGGGCA ACGTGAACGC GCCGCTCGCC
GTCGCCGAGA GCGCCGTCTA CTACGTCATA CGATGTATCA CGGACCCGGA GATCCCACCG
AACCAGGGCT GTTACGATCC CGTCACGGTC GAAGCTCCCG AGGGATCGCT GCTGAATCCG
ACGCCGCCCG CAGCGGTCGT CGGCGGCAAC GTCGAGACGA GCCAGCGGAT CACCGAGGTC
GTCTTCGACG CGCTCGCCGA GGCCGCACCC GACCGCGTCC CGGCCGAGAG CCAGGGGACG
ATGAACAATC TCGTCGTCGG GGGACCGGAC TTCACCTACT ACGAGACCAT CGGCGGCGGC
GCGGGCGCGA CGCCGAACCG GGACGGTGCC TCCGGCGTCC AGGTGGGGAT GACGAACACG
CGAAACACGC CGGTCGAGGC GCTGGAGGCG GCGTACCCGC TGCGGGTCGC CGAGTACTCG
CTGCGCTCCG ACACGGGAGG CTCCGGCCGC CATCGCGGCG GTGACGGACT CGTCCGTGAG
ATCGTCGTCG AGACCGACGC CACCGTCTCG CTCCTGACCG ATCGCCGCCA GACGCCGCCA
GCGGGACGAG CCGGCGGCAC AGACGGGACC GTCGGCGAGA ACTTCGTCGA CGGCGAGGCC
GTTGCCTCGA AGCACACCCG CGCGGTCGAG GCCGGCACCA CCGTCAGAGT CGAGACGCCG
GGCGGTGGCG GCTACGGCGA TCCCGACGGC GCGTGA
|
|---|
| Protein sequence | MTDDAVDAVD AVELEILRNQ LESVAEEMGE VLIRGAYSPN ITERRDCSTA LFDADGRLVA
QAEHIPVHLG AMPRAVDAIR DRDPRPGDVF ALNDPFAGGT HLPDVTFVSP IGAGAGGRSR
SGDRPTGDDD IVAYAVSRAH HADVGGMAPG SMPAGAREIQ QEGLRVPPVR IVADGTVVDD
VLELVLANVR NPAQRRADVQ AQLAANERGA RRIGELLDDH GEGLLAAFDA VVDYSRARME
RELSALEPGT YEAAGTIEGD GVTDTAVPIE ATVTVADGAV TVDFEGTAPQ VAGNVNAPLA
VAESAVYYVI RCITDPEIPP NQGCYDPVTV EAPEGSLLNP TPPAAVVGGN VETSQRITEV
VFDALAEAAP DRVPAESQGT MNNLVVGGPD FTYYETIGGG AGATPNRDGA SGVQVGMTNT
RNTPVEALEA AYPLRVAEYS LRSDTGGSGR HRGGDGLVRE IVVETDATVS LLTDRRQTPP
AGRAGGTDGT VGENFVDGEA VASKHTRAVE AGTTVRVETP GGGGYGDPDG A
|
|---|
| |