Gene Hmuk_0019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_0019 
Symbol 
ID8409515 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp15060 
End bp15803 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content67% 
IMG OID645018356 
Productproteasome subunit alpha 
Protein accessionYP_003175877 
Protein GI257386104 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0638] 20S proteasome, alpha and beta subunits 
TIGRFAM ID[TIGR03633] proteasome endopeptidase complex, archaeal, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGGAC AAAATCAACA GCAGGCGTAC GACCGAGGGA TCACTATCTT CTCCCCGGAC 
GGACGCCTCT ACCAGGTCGA GTACGCACGC GAAGCAGTCA AGCGCGGCAC GGCGAGTGTC
GGGGTCCGCA CGGCAGACGG CGTCGTGCTG GCCGCCGACC GACACGCCCG TTCCCCGCTG
CTGGAACGTG ACAGCATCGA GAAGATCCAC AAGGCCGACG ACCACGTCGG CATCGCCAGC
GCGGGCCACG TCGCCGACGC CCGCCAGCTG ATCGACCTGG CGCGTCGACA GGCCCAGGTC
AACCACCTGC GCTACGGCGA GGAGATCGGC GTCGAATCGC TCACCAAGGA AGTCACCGAC
TACATCCAGC AGTACACCCA GACCGGCGGC GCACGCCCGT TCGGCGTCGC GCTGCTGGTC
GGCGGTATCG AGGACGGCGA ACCGCGCCTC TTCGAGACCG ACCCGTCGGG GACCCCCTAC
GAGTGGCAGG CCGTCGCGAT CGGCGGCGAC CGCGACGAGA TCCAGACGTT CCTCGAAGAG
GAGTACGACG AGGGCATGGA CCTCGAAGCC GGACTCTCGC TGGCGCTGCG AGCGCTGGGA
TCGGTCAGCG ACGACGGCCT CGACGCGACG GGCGTCGACG TAGCCACGAT CGACGTCGAG
TCCGAGCAGT TCACGGCGCT CTCGGAGGAC GAGATCGCCG AACGAGTTAC CGAGCTGGAA
CTCGAAGGTG ATGACGATGA GTAA
 
Protein sequence
MQGQNQQQAY DRGITIFSPD GRLYQVEYAR EAVKRGTASV GVRTADGVVL AADRHARSPL 
LERDSIEKIH KADDHVGIAS AGHVADARQL IDLARRQAQV NHLRYGEEIG VESLTKEVTD
YIQQYTQTGG ARPFGVALLV GGIEDGEPRL FETDPSGTPY EWQAVAIGGD RDEIQTFLEE
EYDEGMDLEA GLSLALRALG SVSDDGLDAT GVDVATIDVE SEQFTALSED EIAERVTELE
LEGDDDE