Gene Hmuk_0016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_0016 
Symbol 
ID8409512 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp12096 
End bp12818 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content69% 
IMG OID645018353 
Producthypothetical protein 
Protein accessionYP_003175874 
Protein GI257386101 
COG category[R] General function prediction only 
COG ID[COG4031] Predicted metal-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.56198 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.718034 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTGTC GGCAGTGTGG CTCCGAACTC GACCGACCGG GCGATTACTG CCTTGTCTGT 
CGGTCGGCGA ACACGGACGT GGTCGTCCTC GAACTCGACC GCGAGCGGGC GACGGTCACC
GCACTCGCCG ACGAGACGGT CGTGGCCGCA CGGACGATCA CGACGACGCC GGAAGCGGGC
GGCGAGACCG GCGTCGTCGA ACTGCGCAAC TTCGCGGGAC TCGTCGCCGA CGACGTACGC
CGTAAGCGGC CCGAAGAGGT GTACGTCACC GGCGATCGCG ACGTGGTGGG GGCCGTCCGC
AGTCAGCTCC ACTACCCGTT CTATCGCGTC GACGGCGATC AGCCGGTCGA ACACGTCCTG
GAGCGACGCG GCGAGCCGGC ACTGGAGGTC GTCGACGCCG CCCCGGAGGA GAAACTCGGC
GGCTCACACT CGACGCTCGT CGGTGGCCGG GCCGGCAAGC GAGCCATCCA GACGGTCGCC
GCCCACCCTC ACGTCAAGAA GGTGATTCCG GGGCCGATCG ACGCCGGTGG GTCGGGATCG
CGGACCGGCG TGCGCGCCAA GGCGACCCGA GCGGACGAAC ACGGCAACGT CAGACTGTTG
ATTCGGGACG GCTCCAGCGT TCAGGAGAAC CGTATCGTGA CGACGGCCGG CGACCGAGAA
CTCGGCGAAC GCGTCCGGGC AGACCTCAAC GACGCGCTGG CCGAGGCGGA CCTCCAGGAC
TAG
 
Protein sequence
MSCRQCGSEL DRPGDYCLVC RSANTDVVVL ELDRERATVT ALADETVVAA RTITTTPEAG 
GETGVVELRN FAGLVADDVR RKRPEEVYVT GDRDVVGAVR SQLHYPFYRV DGDQPVEHVL
ERRGEPALEV VDAAPEEKLG GSHSTLVGGR AGKRAIQTVA AHPHVKKVIP GPIDAGGSGS
RTGVRAKATR ADEHGNVRLL IRDGSSVQEN RIVTTAGDRE LGERVRADLN DALAEADLQD