| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hmuk_0011 |
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| Symbol | |
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| ID | 8409507 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halomicrobium mukohataei DSM 12286 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013202 |
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| Strand | - |
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| Start bp | 8006 |
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| End bp | 10351 |
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| Gene Length | 2346 bp |
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| Protein Length | 781 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 645018348 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_003175869 |
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| Protein GI | 257386096 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3413] Predicted DNA binding protein |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.206274 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.555511 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGGCG AAACCGGGTC CGGATCGGAG ACGAGCGACG GAAAGCGAGT GCTCTACGTC
GACACGCCGA CCGACAGCGT CGCCGACCGG CTCGCCGCTC GCCTCGCCGA CTGTCGCCTA
CACCACGAGA CCGGCGTCGA GGCGGTCACG GCCGCCGAGT CCGAATCGTG GGACGGGCTC
GTCGTGACCG ACGGTATCGA GGCGGACCGA CGCAGCGCGC TCCTCGATGC CGTCGACTGT
CCGTCGGTGC TGTACGCGAG CGCGGACCCG GCGACGATCC CAGCGGAGAC GACACGCCGA
GTCGAGACGA TCGTCGAACG CGAGACCGCG GACGCGGCGT CTCTCCTCGC AGAGAAGATC
GAGACGCTCG TCGGACAGTT CCCCGACGCC TTCGAAGACG CGCGTGGGAG TGCTCTCTCG
ACGATCTGTC GGGAGGTGAC CGAAGGCAGC GCACTGTTCG CCGTCGACGA CGAGGGCCGC
GTGCGCTGGT CGAACCACAG CTTCGAAGCG CTCTTTCCCG TCGATCGGAT CGAGCGCTCG
ATCCCGGAGA CGGAGGACTT CTACGCGCGA CTGGACGCGA TCGTCTCGGC GGAGCCCGAC
GACGGTGGCC GCCGCGACAT CGGCCCTCGG GATGGGCCGG TCGAGAACCA CTCGGTGGTC
GTTGCCACCC CCACTGGCAC CCGCTACTAC GTCCACCAGC GACATCGCCT CGAGAGTGTG
GGAGACGGAA TCACGATCGA GCAGTTCGAG GACATCACGG ACCGCGTCCG TCGCGAGACG
CGGCGGCGAC TGCTCGCGTT GCTGGTCGAA CAGGCGCGCG ACGGCCTGTA CACGCTCGAT
CACAACGGCG TCGTCGACTT CTGTAACGAG TCGTTCGCGG CGATGCTGGG CTACGAACGC
GGAGAGCTGA TCGGGATGCA CGCGTCCGAG ATGCTCGCTC CCGGCGAACT GGTGGCCGGC
CAGCGCACCG TCCAGGCGCT GCTCGACGAC CCCGACACCG ACGGCGCGGA AGTCGACATG
ACCTTCCGGA CCCGCGACGG CGAGGATCGC GAGCTGTCGA TCCACTACAC GCTCCTGTCG
ACCGGCGGGG ACAGTTACGG CGGTCTGATG GGAGTCGCGC GCGACGTGAC CGAACGCCGC
GAGCGGACCC GCCGGATCGA GTCCCAGCGA GACGAACTCT CGACGCTGAG CCGGACGAAC
GTACTGGTAC AGGACATCAT CGGCGCGCTT GGCACCGCTG CCAGCACCAT CGAACTCCGG
CAGACCGTCT GTGATCGGCT GGTCGAGTCG GGTCGTTACG GACTGGCCTG GATCGGCGAG
CGCCACGGTG GCGACGACGT GATCGTCCCG CTGACCAGCG CCGGTGCGTG GACCGAGCAC
CTCGACGATG TCGAGCTCCG CGCCGACGAC GGGGCGGATG CCGCTCCGGT CGCTCGTGCC
TACCGCACCG GCGAGGTACA GGTCGTCTCG GACACGCGAT CGCTGGCGGC GTTCTCGCCC
CGGCCAGAGC GAGCACCGGC TGCTGGCTTC GAGGCGGTGA TCGTCACCCC GCTCTGTCAC
GGCGAGACGA CCCACGGCAT CCTCGCCGTG TACGCGACCG AACCGGACGC GTTCAGCGAG
CGCATCGCAC GTAGCTTCGC CGTCCTCGGG GAGACGATCG GGCTCGCTCT CACGGCGATC
CAGAACAAGC GGCTGCTCCA GCACGAGGCC CCGCTCAGGC TGGCGTTTCG CTCCGACAGC
GACGACGCCT GTCTCGTCCG GGTCGCGCGA AGCTGTGACT GTACGCTCGA AACGGCCGGC
GTCGTCGAGA CCAGCGACGG CGTGGTGCAG TACCTCCGGG TCGACGGAGC CGCCCCCAGT
ACGGTGGTCG ACACGGTCTG CGAGTCCGAG CTCGTCGACG ACGCGGCGGT GACCCGGACC
GACGGGGACT CTCTCGTCGA ACTCCACGGA CCGTCGTCGC CGGGGACGGA GCTCGCAGAG
GTGGGTGCCC GTCTCGTCGA GACCGAGATC GATCCCGGCG GGGCTCGCCT CGTTGTCGAG
ACGACCGGCG ACGCGGACCT CCGATCGGTC CAGACCGTCG TCGAACGGTG GTTCCCGGAC
GTGACGCTCG TCTCCAAGCG CAAGCGGACC CAGCCCGAAA GCGACGGTGA ACGGTCGCCG
CTGTCGCCGC TGACCGACCG CCAACGAGAG GTCCTCCGGG CCGCGTACCT CTCGGGCTAC
TACGACTGGC CTCGCGAGAC GACCGCCGAG GAGCTCGCGG ACTCGCTGGG CATCGCCTCG
CCGACACTCC ACCAGCACCT CCGCCGAGCA GAGCGGAACC TCCTCGCTGG CGTGCTCGAT
CGGTAG
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| Protein sequence | MTGETGSGSE TSDGKRVLYV DTPTDSVADR LAARLADCRL HHETGVEAVT AAESESWDGL
VVTDGIEADR RSALLDAVDC PSVLYASADP ATIPAETTRR VETIVERETA DAASLLAEKI
ETLVGQFPDA FEDARGSALS TICREVTEGS ALFAVDDEGR VRWSNHSFEA LFPVDRIERS
IPETEDFYAR LDAIVSAEPD DGGRRDIGPR DGPVENHSVV VATPTGTRYY VHQRHRLESV
GDGITIEQFE DITDRVRRET RRRLLALLVE QARDGLYTLD HNGVVDFCNE SFAAMLGYER
GELIGMHASE MLAPGELVAG QRTVQALLDD PDTDGAEVDM TFRTRDGEDR ELSIHYTLLS
TGGDSYGGLM GVARDVTERR ERTRRIESQR DELSTLSRTN VLVQDIIGAL GTAASTIELR
QTVCDRLVES GRYGLAWIGE RHGGDDVIVP LTSAGAWTEH LDDVELRADD GADAAPVARA
YRTGEVQVVS DTRSLAAFSP RPERAPAAGF EAVIVTPLCH GETTHGILAV YATEPDAFSE
RIARSFAVLG ETIGLALTAI QNKRLLQHEA PLRLAFRSDS DDACLVRVAR SCDCTLETAG
VVETSDGVVQ YLRVDGAAPS TVVDTVCESE LVDDAAVTRT DGDSLVELHG PSSPGTELAE
VGARLVETEI DPGGARLVVE TTGDADLRSV QTVVERWFPD VTLVSKRKRT QPESDGERSP
LSPLTDRQRE VLRAAYLSGY YDWPRETTAE ELADSLGIAS PTLHQHLRRA ERNLLAGVLD
R
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