Gene Hmuk_0002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_0002 
Symbol 
ID8409498 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp2764 
End bp3687 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content67% 
IMG OID645018339 
Productribulose-1,5-biphosphate synthetase 
Protein accessionYP_003175860 
Protein GI257386087 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1635] Flavoprotein involved in thiazole biosynthesis 
TIGRFAM ID[TIGR00292] thiazole biosynthesis enzyme 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.512704 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAT TCGAGCAGTT CAGCGACGTC GGTGAGGCGG AAGTCACACG CGCGATCGGG 
CAGGAGTGGA CCGAGGAGTT CATGGACTTC TCGGACTCCG ACGTGATCAT CGTCGGCGGC
GGCCCCTCCG GGCTGACCGC GGCCAAGGAA CTGGCCGAGC GCGGCGTCCA GGTCATGGTC
GTCGAGAAGA ACAACTACCT CGGCGGGGGC TTCTGGCTTG GCGGGTTCCT GATGAACAAG
GTCACCGTTC GAGACCCCGC ACAGAACGTG CTGGACGAAC TCGACGTGGA CTACAAGCAG
TCCCAGGACA GCGACGGACT CTACGTCGCC AACGGTCCCG AAGCCTGTTC CGGCCTGATC
AAGGCCGCCT GTGACGCCGG TGCGAAGATG CAGAACATGA CGGAGTTCAC CGACATCGTC
ATCCGCGAGG ACCACCGCGT CGGCGGGATC GTCATGAACT GGACGCCGGT CCACGCGCTG
CCCCGCGAGA TCACCTGCGT CGATCCGATC GCCGTCGAGG CCGACCTCGT CATCGACGCG
ACGGGCCACG ACGCGATGGC CGTCAAAAAG CTCGACGAGC GAGGCGTCCT CAACGCGCCC
GGTCTCGAAG AGGAAGCCAG CGGCATGGAT TCCACCGGCG ACGACACCTA CGGCGCACCG
GGCCACGACT CGCCCGGCCA CGACTCGATG TGGGTCGGCA AGAGCGAGGA CGCCGTCGTC
GAGCACACCG GCCTCGCCCA CGACGGCCTC ATCGTCACCG GGATGGCCAC CGCGACCACC
TACGGGCTGC CCCGCATGGG TCCGACCTTC GGTGCCATGC TGCTCTCGGG CAAGCGCGCC
GCACAGGCCG CGCTGGACGA ACTCGAAGTC GACGCCGAAC CGGTCGACGT GACGGCGACG
AACGCGACCC CCGCGGACGA TTAG
 
Protein sequence
MSEFEQFSDV GEAEVTRAIG QEWTEEFMDF SDSDVIIVGG GPSGLTAAKE LAERGVQVMV 
VEKNNYLGGG FWLGGFLMNK VTVRDPAQNV LDELDVDYKQ SQDSDGLYVA NGPEACSGLI
KAACDAGAKM QNMTEFTDIV IREDHRVGGI VMNWTPVHAL PREITCVDPI AVEADLVIDA
TGHDAMAVKK LDERGVLNAP GLEEEASGMD STGDDTYGAP GHDSPGHDSM WVGKSEDAVV
EHTGLAHDGL IVTGMATATT YGLPRMGPTF GAMLLSGKRA AQAALDELEV DAEPVDVTAT
NATPADD