Gene Hmuk_3403 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_3403 
Symbol 
ID8409481 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013201 
Strand
Start bp206092 
End bp206997 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content67% 
IMG OID645018324 
ProductUspA domain protein 
Protein accessionYP_003175845 
Protein GI257373071 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCCAG CGATCGATTC GATACTCGTG CCGACCGACG GGAGCGAGGG AGCCACAGTC 
GGCGCACAGC GCGGGATCGA CCTGGCGGCG ACGGCCGACG CGGACGTACA CGTGCTGTCG
GTGGTCGACA CCCGCGAGAT CGAGCCGCCG CTGTCGCGGT TCGGTGGCAA GGACCGTTCA
GACAGAGAAC AGCTGTTCGA GGACGAGGCC AAGCGGGCAG TCGATAGCGT CGCCGGGCTC
GCACGGACAC ACCTCTCAGG TCGAGTCACC GGAACAGTCG AGCGAGGCGT GCCGTTCCAG
GCGATCAACG AGTACGTCGA GGCACACGAC ATCGACGTGG TCGCGATGGG GACCCACGGA
CGGACCGGCC TCCAGCGACT CCTGCTGGGC AGCGTCGCCG AGAAGGTCCT TCGGACTGCG
AGTGTCCCGG TCGTTGCAGT CCCGTCGACC GCCGACGAGA TCGAGCCCGG CGAGGGAAGC
TACGAGAACA TCTTGCTGCC GACGGACAAC AGCGATGGCG CGTCGGTCGC GATCGACTGG
GGGATGACGC TGGCGACGCT GTACGGTGCG ATGGTATACA CCATCTACTC GGTCGATACG
AGCCTGTTGT CCGGGTCCGA GAGAGCGAGC GAGATCCACG GAGCGCTGGA ACGGGTCGGC
CGAGACGCGC TCGATGCGGT CCGACGGCGT GCTCGGGCGG CCGACATCAG TGTCGCGGGC
AACATTGGGA GCGGACCGGC CGCGCGCGTG ATCCTCGCCG AGAGCGGCGA CCACGACATC
GATCTGATCG TGATGGGGAC CCACGGCCGT TCCGGTATCG ACCGGTACCT CATCGGCAGC
GTGACCGAGA CAGTCGTTCG CAACGCCGAC GTGCCGGTCT GCTGTGTCCC GATGACGGAG
CTGTGA
 
Protein sequence
MSPAIDSILV PTDGSEGATV GAQRGIDLAA TADADVHVLS VVDTREIEPP LSRFGGKDRS 
DREQLFEDEA KRAVDSVAGL ARTHLSGRVT GTVERGVPFQ AINEYVEAHD IDVVAMGTHG
RTGLQRLLLG SVAEKVLRTA SVPVVAVPST ADEIEPGEGS YENILLPTDN SDGASVAIDW
GMTLATLYGA MVYTIYSVDT SLLSGSERAS EIHGALERVG RDALDAVRRR ARAADISVAG
NIGSGPAARV ILAESGDHDI DLIVMGTHGR SGIDRYLIGS VTETVVRNAD VPVCCVPMTE
L