Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hmuk_3401 |
Symbol | |
ID | 8409479 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halomicrobium mukohataei DSM 12286 |
Kingdom | Archaea |
Replicon accession | NC_013201 |
Strand | + |
Start bp | 204462 |
End bp | 205328 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 645018322 |
Product | UspA domain protein |
Protein accession | YP_003175843 |
Protein GI | 257373069 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTTCGACG ACATCCTCGT TCCGACGGAC GGCAGTACCT GTGCAGCGGT CGCGCTCAGC GCCGCCGAAG AGGTAGCGAA GCGATACGGA GCGACGATTC ATCTCCTGTC CGTGGCCGAT TCACGGATCG AGGACCACAC CGTCGGCGAC GAGAGTCAGC ACGCGGCACA CGAGACGATC GTTCGCGACG CCAGCGAGGA TCTCTCGGCA GAGATCGGCG TCGTAGAAGC AGTCGAGCGG GGACTGCCAC ACGAGGTGAT CGTAGAGTAC GCCGACGAGG CGTCGGTCGA CCTCGTGGTC ATGGGCACGC ACGGGCGGAC CGGCGTCCAG CGATACGTGC TGGGCAGCGT CACCGAGAAG GTGCTCCGGC TGGCCGAGAC GCCCGTGCTC ACGGTCCGGG AAGCGGACGC CGACGAGCGC CCGACGCCCT TCGAAGACGT GCTGATCCCG ACCGACGGCA GCGACGCCGC GAACGCGGCG ATCGGTCCGG CCCTCGACAT CGCCGGTGCG TACGACGCCA GCGTCCACGC GCTCTCGGCG ATAGAGCCGC TGTCGATGGG CGTCGATGTT CGGTCACACG TCATCGTGGA GGCACTCGAA GAACGGGCCC AGTCGGCCGT CGACGACGTG GCCGAGCGAG CCGCGAACGC GTCGCTCGGA CCGATCGAAA CCGCCGTCGA GTTCGGCGAT CCGTACCGAC AGATCAGGAC CTACGTCGAG GAGAACGACA TCGATCTGGT CGTCATGGGC ACCCACGGCC GAAGCGGCGT CGAGCGGTTC CTGCTGGGCA GTGTCACCGA AAAGCTCGTC CGAACGTCGT CGGCTCCCGT GATGACCGTG AGACGGCCAG AGAACAGCGG GAGTTAG
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Protein sequence | MFDDILVPTD GSTCAAVALS AAEEVAKRYG ATIHLLSVAD SRIEDHTVGD ESQHAAHETI VRDASEDLSA EIGVVEAVER GLPHEVIVEY ADEASVDLVV MGTHGRTGVQ RYVLGSVTEK VLRLAETPVL TVREADADER PTPFEDVLIP TDGSDAANAA IGPALDIAGA YDASVHALSA IEPLSMGVDV RSHVIVEALE ERAQSAVDDV AERAANASLG PIETAVEFGD PYRQIRTYVE ENDIDLVVMG THGRSGVERF LLGSVTEKLV RTSSAPVMTV RRPENSGS
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