Gene Hmuk_3386 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_3386 
Symbol 
ID8409464 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013201 
Strand
Start bp190030 
End bp191316 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content69% 
IMG OID645018308 
Productbeta-lactamase domain protein 
Protein accessionYP_003175829 
Protein GI257373055 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCCG AAGACTTCCC GACTCCCGAC GCCGACGTTG CGAGCGTCGC GCCGGAGACG 
CTGAAGGATC GAATCGACGA CGGAGAGAGC GTGACGCTGC TCGACGCGCG GATGAGCACG
GAGTACGAGA AGTGGCACGT CGACGGCGAG AACGTCACGT CGATCAACGT CCCCTACTTC
GAGTTCCTCG ACGACGAGAT CGACGAGAGC GTGCTCGACC GGATCCCCGA CGACCGCGAA
GTGACAGTCC TCTGTGCGAA GGGCGGTGCC AGCGAGTACG TCGCGGGCAC GCTCGTCGAG
CAGGGCTACG ACGTGGACCA CCTCGAAGAC GGGATGAACG GCTGGGCGAG CATCTACGAG
GCCGTCGAGG TCCAGCGCTA CGACGGGGCG GGAACGCTAC TCCAGTACCA GCGACCCTCC
ACGGGCTGTC TGGGCTATCT GCTCTACGAC GACGGGGAGG CGGCGGTCAT CGACCCGCTG
CGGGCGTTCA CCGACCGCTA TCTCGCGGAC GCCGCAGAAC TCCGTTCCGC GAGCCCTGCC
TCGCAGGCTC GGCAGGACGA GGACTTCGGC GTCGACCTGC AGTACGCGCT GGACACCCAC
GTCCACGCCG ACCACATCTC GGGCGTGCGC GCCCTCGACG ACGAGGGTGT CGAGGGCGTC
ATTCCCGAGG CGGCCGTCGA CCGCGGCGTC ACGTACGCCG CGGACGGAAG TTCCGCGAGC
CCTGCCTCGC AGGCTCGGCA GGACGCAGAC GCCCTCACCA CGGCCGCGGA CGGCGACACC
TTCCAGGTCG GCGACGCCAC CATCGAGGCC GTCCACACGC CCGGCCACAC GACCGGGATG
ACCTCGTATC TGATCGACGA CAGCCTGCTC GCGACCGGCG ACGGACTGTT CATCGAGAGC
GTCGCCCGCC CCGACCTCGA AGAGGGCGAC GACGGCGCGC CCGACGCCGC GCGCACGCTC
TACGAGTCGC TACAGGAGCG CGTGCTGACG CTGCCCGACG ACACGCTGAT CGGCGGAGCC
CACTTCAGCG ACGCCGCCGA ACCCGCCGAC GACGGCACCT ACACCGCCCC AATCGGCGAG
CTCGTCGCGG AGATGGACGC GCTCACGATG GACGAAGAGG CGTTCGTCGA CCTGATCCTC
TCGGACATGC CGCCGCGGCC GGCCAACTAC GAGGAGATCA TCGCGACGAA CCTCGGCCAG
AACGCCGTCG ACGACGAGAA GGCGTTCACG CTCGAACTCG GCCCGAACAA CTGCGCCGCG
AGCCAGGGCT CGCTGGCGGA TGACTGA
 
Protein sequence
MNAEDFPTPD ADVASVAPET LKDRIDDGES VTLLDARMST EYEKWHVDGE NVTSINVPYF 
EFLDDEIDES VLDRIPDDRE VTVLCAKGGA SEYVAGTLVE QGYDVDHLED GMNGWASIYE
AVEVQRYDGA GTLLQYQRPS TGCLGYLLYD DGEAAVIDPL RAFTDRYLAD AAELRSASPA
SQARQDEDFG VDLQYALDTH VHADHISGVR ALDDEGVEGV IPEAAVDRGV TYAADGSSAS
PASQARQDAD ALTTAADGDT FQVGDATIEA VHTPGHTTGM TSYLIDDSLL ATGDGLFIES
VARPDLEEGD DGAPDAARTL YESLQERVLT LPDDTLIGGA HFSDAAEPAD DGTYTAPIGE
LVAEMDALTM DEEAFVDLIL SDMPPRPANY EEIIATNLGQ NAVDDEKAFT LELGPNNCAA
SQGSLADD