Gene Hmuk_3375 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_3375 
Symbol 
ID8409453 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013201 
Strand
Start bp176478 
End bp178817 
Gene Length2340 bp 
Protein Length779 aa 
Translation table11 
GC content70% 
IMG OID645018298 
Productheavy metal translocating P-type ATPase 
Protein accessionYP_003175819 
Protein GI257373045 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2217] Cation transport ATPase 
TIGRFAM ID[TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01525] heavy metal translocating P-type ATPase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGAGT GTACTCTCTG TGGCCTGCCG ACACCCGATC CGCCCCACAC CGCTCCGGAC 
GTGGACGGTG CCTTCTGCTG TCAGGGGTGC CTGACGGTCG CCCGCACGCT CGACGACGCG
CCCGCCGACG CCGATCCCCA GACGGCCGTC GACACCGGGC CAGACGTGGA CTCCGTCGAT
GGCGATCGGG CCTACTTCGA CGTCGACGGA ATGCACTGTG CCACCTGCGA GACCTTCCTC
GAAGCCACCG CGACCGACGC TCCGGGCGTT CGGGCCGCCG AGGCCAGCTA CACCGCTGGG
ATGGTCCGTG TCGTCTTCGA TCCGGCGACG GCCGAACCCG ACGCGATCGC GGACCGCATC
TCGGGGCACG GCTACGACGC GACCCAGGAG GGCGCGGCGT CGGCCGACGA CGCCCAAGAG
ACCGTCGGTC GTCTCATGGT CGGTGGCTTC TTCGGGATGA TGGTGATGGC CTGGTACGTC
CTCTTTCTCT ATCCCGTGTA CACGGGCGTC GCGCCGTCGT CGCTGCTCGT CGACCTGGAC
GGTCCCGCGG GTGGGTTCCT GTTCGCGAAC GTCTGGGTCA TGGCGACGGT CGTGGTGGCC
TACACCGGCT ATCCGCTGTT CCGTGGTGCG GTCGTGAGCC TGCGGGTCGG CCACCCGAAC
ATGGACTTGC TCGTGGCGAT CGCGGCGGCG ACGGCCTACG TCTACAGCAC GATCGCGATG
GCGCTCGGTC AGACGGATCT GTACTTCGAC GTGGCGGTCG TCGTCGTCCT CGCGGTGACC
GTCGGCGACT ACTATCAGGA GCGTGTCCGC AGACGGGCCA TGGGCCGCCT CGCAACGGTC
TCCGACGAAC GAGCGGACGC GGCACGCCGC CGGACGGCCG ACGGCATCGA GTCGGTTTCT
CGGTCGGCAG TCGACGGCGG TGACGAACTG GTAGTCAAAG GTGGCGAACC GGTCCCCGTC
GACGGGACGG TCGTCGAAGG CACGGCCGCG GTCGACGAGT CACTGGTCAC CGGCGAGTCG
CTGCCCGTCT CGAAAGCCAC CGGGGACGCG GTTCTCGGCG GGACGACGGT CACGGACGGT
GGGGTCGTCG TCCGCGCTGA CGAGGACCCG ACGAGCACTG TGGACCGACT CGCAGAGACG
CTGTGGGAGG TACAGAGCGC GACACCCGGC GCACAGCGCC TCGTCGACAG GATCGCGGCG
GTGTTCGTCC CGCTCGTGTT CGTCCTGGCT GTCGGGACGC TGGTCGTCCA CCTGCTCGCG
GGCACTGGAG CGACCGCGGC ACTGTTGACC GGCCTGACCG TCCTCGTCGT CTCCTGTCCC
TGTGCACTGG GTCTGGCGAC GCCGATGGCC GTCGCCGCTG GGATTCGAGA CGCTCTCGAC
GCGGGCATCG TGATCACCGA CGACACAGCC CTGGAGACGG CACCGGCGGT CGAGACTGTC
GCGCTCGACA AGACGGGCAC CCTCACCACT GGATCGATGA CCGTTCGGAC GGTCGTGGGC
CACGACGAGA GCCTCGCGTA CGCCAGCGCC GTCGAACAGT TCGCGACCCA CCCCGTCGCG
GAGGCGATCT CCGAGGCGGG GACACCGCCC GACGAGCCCG TCACGGCCTT CGAGACGATC
CCCGGACGGG GCGTGCAGGC GACAGTCGGC GACAGGACCG TGCTGGTCGG CGACGAGTCG
CTGTTCGCGG CGCGGGACTG GACCGTCCCC AGCGGCGTGG CCGCCACCTA CGACGGTGCC
GGTGACGACG CGATCGCGAG CTACGTCGGC TGGGACGGGC GCGTTCGCGG TGCCGTCGTC
GTCGGTGACG AGGTGCGCGA GGGGTGGCAA TCGGTGCTCG ATCGCCTCGC GGCCGACCGC
CGCGTCGTCG TGATCACGGG CGACGACCGG GCGGCAGCCG AACAGTTCGC GTCCCACCGC
TCGGTCGACG AAGTCTTCGC CGGTGTCCCG CCCGAGGCCA AGGCCGCGGT CGTCGATCGG
CTGGGGGTCG ACGGCACCGT GGCGATGGTC GGCGACGGGA GCAACGACGC GCCGGCACTG
GGGGCAGCTG ACCTCGGGAT CACCGTCGAG AGTGGCACAC GGCTCGCGTT CGACGCGGCG
GACGTGGTCG TCACCGACGA CTCTCTCGCC GCGCTGCCAG AGGTGTTCGC CACGACGGAA
GGGACCCGCC GACGGATCCG CGAGAACCTC GGCTGGGCGT TCCTGTACAA CGGGATCGCG
CTGCCACTCG CCGTCGTCGG TGTCCTGAAC CCCCTGTTTG CCGCCGTGGC GATGGCGACC
AGTAGCCTGC TCGTCGTGCT CAACTCGACC CGTCCGGTCG GTAGCGAGGC GGGGTCGTAA
 
Protein sequence
MGECTLCGLP TPDPPHTAPD VDGAFCCQGC LTVARTLDDA PADADPQTAV DTGPDVDSVD 
GDRAYFDVDG MHCATCETFL EATATDAPGV RAAEASYTAG MVRVVFDPAT AEPDAIADRI
SGHGYDATQE GAASADDAQE TVGRLMVGGF FGMMVMAWYV LFLYPVYTGV APSSLLVDLD
GPAGGFLFAN VWVMATVVVA YTGYPLFRGA VVSLRVGHPN MDLLVAIAAA TAYVYSTIAM
ALGQTDLYFD VAVVVVLAVT VGDYYQERVR RRAMGRLATV SDERADAARR RTADGIESVS
RSAVDGGDEL VVKGGEPVPV DGTVVEGTAA VDESLVTGES LPVSKATGDA VLGGTTVTDG
GVVVRADEDP TSTVDRLAET LWEVQSATPG AQRLVDRIAA VFVPLVFVLA VGTLVVHLLA
GTGATAALLT GLTVLVVSCP CALGLATPMA VAAGIRDALD AGIVITDDTA LETAPAVETV
ALDKTGTLTT GSMTVRTVVG HDESLAYASA VEQFATHPVA EAISEAGTPP DEPVTAFETI
PGRGVQATVG DRTVLVGDES LFAARDWTVP SGVAATYDGA GDDAIASYVG WDGRVRGAVV
VGDEVREGWQ SVLDRLAADR RVVVITGDDR AAAEQFASHR SVDEVFAGVP PEAKAAVVDR
LGVDGTVAMV GDGSNDAPAL GAADLGITVE SGTRLAFDAA DVVVTDDSLA ALPEVFATTE
GTRRRIRENL GWAFLYNGIA LPLAVVGVLN PLFAAVAMAT SSLLVVLNST RPVGSEAGS