| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hmuk_3309 |
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| Symbol | |
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| ID | 8409387 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halomicrobium mukohataei DSM 12286 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013201 |
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| Strand | + |
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| Start bp | 110210 |
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| End bp | 113638 |
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| Gene Length | 3429 bp |
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| Protein Length | 1142 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 645018241 |
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| Product | ATP-dependent exoDNAse (exonuclease V) beta subunit-like protein (contains helicase and exonuclease domains) |
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| Protein accession | YP_003175762 |
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| Protein GI | 257372988 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGACG GCGTCCCGCC CCTGGAGGGC GCACAGGACC GGATTCGCGA CGCGTTCCTC
GCTCACGACC GGGGGCTGTT CGTCCTCGAC TGTACGGCGG GCTTTGGCAA GTCGACGACC
GTCGAGCGCG TCGCCGCCGA GGCGCTGGTC GAAGCGGGCG CGCAAGCGGC CGCTCCCGAA
CGGGGGCTCT GCGTCGTCTC GTTCTCCCGC GAGGACGCTG CCGGTATCGT TCCGGGGATC
ACTGCCGCGC TGGCCGCGTT CGCCGACGAC GAGCAGCCGA CGGCGACCAC TATCAGCCCC
GAGCGTTCAC GGCGGCTCCA GGAGCGGGTC CGCCACGCCG ACCACGTCGG GACCATCGAC
AGCATCTTTC GCACCGTCTT CACGGAGATT CACGCCGAGT ACGGCTTCGA GCAGATGCCG
ACGGTCGGCA ACGACGCGCG ACTCTCCTCG CTCCGAGAAG CGGCGCTGGA CGCCCTGCGT
GGTCGCGAGT CACTGACGGC CCGGTTCGAC CGTCTCGACG AGGCCTACGG CGACGAGACG
GCCAGCGACG GACGGGGGGC CGACGGGCGC ACGCTGGACA CGCTGCTCGA AACGGCCCGC
TCGGCCAAGC GCGCCCGCAG GCTCTCCGAC GAGCAGTTCC GCGACAGACT CCTGGGCGCG
ATCGACGAGG CCTTTCCGGA CGGTCGCCCG GCCACGTTCG ACGCCGTGGT CCGTGACGTG
GCGCGGTTCT TCGACGAGGA GACCGCCGCG GCGTTCCGGC GACGCCACGA CGACGAGGCG
GCGGTCACGG CCCAGTCCCG GGCGTGTTTC GACCGCTGGC GTGCGCGCGT CGAGGAGTTC
TGTTCGCTCG TGGTCGCCTA CGAGACCGAG TACGACCGCC GGTGTCGCGA GCGCGGCGTG
CTCGCCCACC AGGACGTGGC GTACTGGGTC GCCGACTTCT TCGACGAGTC CGGCGACGCC
GACGACTCGT TCCGCGAGCG GGTCCGACAG CGCCACGCTC ACGCCCTCCA GACCCTCGTC
ATCGACGAGG CCCAGGACGT GTCCGTCGCA CAGCACGACG CGCTCGCGCC GCTGGTCCCC
GACGACGCCC GCGTCCTGCT TGCCGGGGAC ACCGACCAGT GTATCTACGC CTGGCGCGAC
GCCCGGCCGG CGCTGTTCAC GCGAGCGTTC GACGAGGGGA CGTACTTCGG GCGCTCCTGG
ACGCCCCACG AGCGGGCCGA CGCCGCACGG ACCTATCGGA TGCGACCGGA CGTCTCGGCG
GCCGTCGACG CCGTCTTCGA GACGGTCTTT ACCGATCCCG CACGCGGTGC CGTACACCGG
ACCGGCGACG GCTACGCGCC CGTCGAGACC GACCGCGAGG CGACGAGCGA GCCGGCGGTC
CACGTCGCGA GCTACCGGGC GCGGGGCTCT CCGGGGACGA CCACGTGGTT CGAGGAGAGC
GAAGCAGCGC CGCTCTCGAA CTACCTCCAC GGTGCGCTGG CCGACGACGG CTTCGCGGGC
CGAGACGCCG ACGGCCCGGT GGAGGTCCTC TTTCCGACGC GGACGAACAT GCGCTCGCTC
GCCGCTCGTC TGGAAGCGAA GGGGCTGTCC GTCGCCGACG CCAGCGAACT GCTGTTCGAG
ACCCCGCTCG TCGAACTCGT CGTCGGCGTC GTCGAGTGGC TCGTCGATCC GTTCGACCCG
GAGCGAACGC GCGCGCTCTT CGACGGCGCG GTTCCGGCGG TGACCTGCGA CGACGGGTCG
ACCGTCCGAG AGATCGCTGC CGCAGCCGAC TATCGCCTCG ACGAGATCGG GGCCGACGAT
CGACTCCCGG CCCGCGTCGA GACGTTCCTC GACGACCTCG CCGAACTCCG CGGGCGGCTC
GCGCGACGGA CGGCCGATCC GGGGGCGCTC GTCGTCGCGA CCGTCGTCGA GACGCTGGCC
CTGGGGACCG ACCCGTTCGA CCAGGTCGAC GATCCGCGGC GCTGTCTCGC CGTCCTCGAT
ACGCTCGTCG AGACCGTCGA GTCGTGGGAG GGGACCGACC GCTACTCGCT GTCCGAGCTG
GCCGGCGTCC TCCAGCGGTA CCGCGCGTCC CCGTCTCACG GGCCGCTCGT CCCGGTGCCC
GACGACAGCG ACTACGACGT GGTGTTCCGG ACGATCCACA ACGCGAAAGG CGACGAGGCC
GATATCGTCT GCCTGGCCGA CCTGAGCCGA CCACTCGGGG TCCACGGCCC ACATCGCGAT
TCGTTCGTGG CCCGCGGTGA GACGCTCGCG CTCGCACCGC CAGCGACCGC GCCGTCGGTT
CCCGTCGACG AACCCAGCGC TCACGGCGTC GAGTCGGTGC CGCGGCTCCG CTGGGCGACG
AACCGCTGGG TCGGGGACGA GCAGCCGCGA CTCGGCGGAC CGCCGGTGTT CAGCGAGCTC
GCCGCCGCAC ACCGCGCGGA CCGCTGGCGG ACGCTGTACG TCGCCATGAC GCGGGCCCGG
GACCACCTCG TCCTCTCGGT GCCACGGGAC GCGACGAGCC ACGGAACGCC GCCACAGGAC
AGCTGGGTGA CGACGATCCG GCGGGCACTC GCTCTCCCCG ACTCGCTGGA GCGCGGCCGG
ATCGACACCG CGCTCCAGCG ACCGACCGGG GAGTACCCGC TGGCGATCGG CTGTCTCGAC
GTGGCCTACG ACGCCAGCGT CTCGCAGTCG AGTCGCCCGA CGCCGCGGAC TGCGCTCGCG
CCGTCGCCGA CTCGGACGGG CCGGACGCCC CGCTTCGTCA ACGGCAGTAC GCTCTACCCG
CTGGCGACGG GACTGGACGA GCACTGGCTC GCCCACCTCA AGGGGGCCCC GCTCCACAGC
GACCGTCCCG CTCCCGACGA CGGCCTCCCG CTGGCCTTCG ACGCGGTCGG CCCCGACGAC
CTCGGGACGA TCGCACACGA CGTGCTCACG ACCGCCGTCG ATCGAGGCGT CTCGACCGCG
ACGCTGGAAG ACTGTGCCGA ACCGCTCGCG GGGCGGCTCG ACGCCGCTAT CGACGAGCAG
TGCCGCGACG TTGGCGGCCG TGAGCGCCAG CAGGTGGCGA GCTACGTCCG CGAGACCGTC
TGCCCGCAGT TCGCCTCGAC CGGCGTCTGG GAGCGCTTGC AGTCGAGCGC CGTCTACGTC
GAGGAGCCAC TCGACGCCGT GCTTCCCGTG GCCGACCACA CCATCGAGAC CCGGAACCAC
GCCGACATCG TCTCGCGCGC TCCGGACGGC ACGTGGTACG TCGACGACAT CAAGCTCGTC
CTCGCCGACA CCGACGCCAC CCGGGACCGA TACGCGCTCC AGACCGCCTT CTACGCCTGG
CTGCTCGAAC GCCAGCTCGA CGACGCGACG GTCCGGGGGC GCATCACGTG CGTGGGCGAG
CGCGTCGACT CGACGGCCGG CACTGCGCCG GTCGACGACA TCGAGTCGTG GCTCGCGCGG
TTCGCGTGA
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| Protein sequence | MTDGVPPLEG AQDRIRDAFL AHDRGLFVLD CTAGFGKSTT VERVAAEALV EAGAQAAAPE
RGLCVVSFSR EDAAGIVPGI TAALAAFADD EQPTATTISP ERSRRLQERV RHADHVGTID
SIFRTVFTEI HAEYGFEQMP TVGNDARLSS LREAALDALR GRESLTARFD RLDEAYGDET
ASDGRGADGR TLDTLLETAR SAKRARRLSD EQFRDRLLGA IDEAFPDGRP ATFDAVVRDV
ARFFDEETAA AFRRRHDDEA AVTAQSRACF DRWRARVEEF CSLVVAYETE YDRRCRERGV
LAHQDVAYWV ADFFDESGDA DDSFRERVRQ RHAHALQTLV IDEAQDVSVA QHDALAPLVP
DDARVLLAGD TDQCIYAWRD ARPALFTRAF DEGTYFGRSW TPHERADAAR TYRMRPDVSA
AVDAVFETVF TDPARGAVHR TGDGYAPVET DREATSEPAV HVASYRARGS PGTTTWFEES
EAAPLSNYLH GALADDGFAG RDADGPVEVL FPTRTNMRSL AARLEAKGLS VADASELLFE
TPLVELVVGV VEWLVDPFDP ERTRALFDGA VPAVTCDDGS TVREIAAAAD YRLDEIGADD
RLPARVETFL DDLAELRGRL ARRTADPGAL VVATVVETLA LGTDPFDQVD DPRRCLAVLD
TLVETVESWE GTDRYSLSEL AGVLQRYRAS PSHGPLVPVP DDSDYDVVFR TIHNAKGDEA
DIVCLADLSR PLGVHGPHRD SFVARGETLA LAPPATAPSV PVDEPSAHGV ESVPRLRWAT
NRWVGDEQPR LGGPPVFSEL AAAHRADRWR TLYVAMTRAR DHLVLSVPRD ATSHGTPPQD
SWVTTIRRAL ALPDSLERGR IDTALQRPTG EYPLAIGCLD VAYDASVSQS SRPTPRTALA
PSPTRTGRTP RFVNGSTLYP LATGLDEHWL AHLKGAPLHS DRPAPDDGLP LAFDAVGPDD
LGTIAHDVLT TAVDRGVSTA TLEDCAEPLA GRLDAAIDEQ CRDVGGRERQ QVASYVRETV
CPQFASTGVW ERLQSSAVYV EEPLDAVLPV ADHTIETRNH ADIVSRAPDG TWYVDDIKLV
LADTDATRDR YALQTAFYAW LLERQLDDAT VRGRITCVGE RVDSTAGTAP VDDIESWLAR
FA
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