Gene Hmuk_3300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_3300 
Symbol 
ID8409378 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013201 
Strand
Start bp98790 
End bp101177 
Gene Length2388 bp 
Protein Length795 aa 
Translation table11 
GC content69% 
IMG OID645018233 
Productserine/threonine protein kinase 
Protein accessionYP_003175754 
Protein GI257372980 
COG category[S] Function unknown 
COG ID[COG1520] FOG: WD40-like repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTGATC GAGAGCCGAC GCTCGACCGC GTCCGGAGTC CGCCCCGGCG GGACCTCTCT 
GCGGATCTCG TTCGGTCCGG TGAACTGATC GACCGGGGCG GCAACGCGCT CGTCTCCGTT
GCTGCCCTCT CGGACGAACG GTCGCCCGAC CGGATCGCGG TCAAAGAACC GCTGGCTCCG
GGGACGCTCG AAAACGACGA GATCGAGCGG TTCCTCTCGC AGGCCGAGAC GTGGGAGACG
GTCGACCGCA TCGAGCGAGA ACGCCCGCGA TGGCGGGACT CGGAGCACGT CGTCGGCGTC
GTCGACACCG GCGAGCGCCT GCCCTGGATC GCGATGGAGT ACATGGACGG CGGCACGCTC
GCGGACCGCC TGGCGGCCGT GGACGGCGGG CTCCCGACCC TAGAGGTGCT GTGGATCGGC
GAGTGTGTCT GTCGCGGCGT CGCGGTCGCT CACAGCCTGG GGATCGCACA TCTCGATCTC
AAGCCGGCGA ACGTTCTCTT TCGCTCGACG CCCGACGGCG TCTGGGACGT TCCGAAGGTC
GCCGATTGGG GACTCGCCCG CGTGCTGGCC GATCAGACCG GCACGGTCGA GGGGCTCTCG
CCCGCCTACG CCGCGCCCGA GCAGTTCGAG CCCGGGGAGT TCGGCGAGCC CGACACGCTG
ACGGACATCT ACCAGGTCGG GACGATCCTG TACGAGCTCC TGACCGGGAC ACCGATCGCG
CCCGAGAGCC GCTTCCAGGC CATGCAGGTT GCGATGTCCT CAGACCCCGT GTCGCCTCCC
AGCGCCGAAC GGCCCGCGCT CTCTCCGGCG GTCGACGCCG TCGTGTCGAG CGCGCTCGAA
CGGGACAAGA CGGATCGCTA CAGCGCGATT CCGGTGATGG CAGACGCGCT CCGGGCCGTC
CGTACCGGCG GCGACCTGCC ACCGATCGTC GGCGACCGTC TCGACGGCCG GTCAGAACGA
ACCGGGGACG CCCGCCCGGA GCGAACAGAC ACGTCGACGC CGCCAGCCCC GGAGCGCGAC
GACGAGCGGG CGGCGACGAA CGACGGGGGT GCCGGCGACC CGGAACTGGT CGAGCGAGTG
ACCGACTACG ACAACTACGG GTCGTACTCC GCCTCGCCCG GCGATCACGA CGGCGTCACG
ACTGGGCGGT CCGACGGGCA CGCGGACGAC GAAGCGTCGT CGGACGACCC GCGAACCCAT
CCGGCCTCAG AAAGCGAATC GATGGCCGAC CGCGTCGCCG CCTACGAGAA CCACCGCTCG
GTCAACGCCT CGCCCGGCGA CCACACCGCC GTCGCTGCCG AGTCGACGAA CGGCGCTCGC
GAACCTCGGG CGGCGTCCGG TCTGCCCCCT CGGACCGCTG GGTGGCCAAC ACTCGGTGGG
AACTTCGCAC GGACGGGAAC GAGCGGCGAT CCCGACGGCC CGGAGAGCGC GGTGTCGGTC
GCCTGGACGC ACTCGACGCC GGATCTCGTC AAGGTCGCGC CGGCCGTCAG CGACGGGATC
GTCTACGCCG GACCGGAACG GGGGACTCTG CGCGCACTGG ACGCACAGAC GGGAGAGACC
GTCTGGACGA GCGGACGCCT CCTGGAGACG GCCTCGGCAC CGGCCGTCGC CGACGGGCAG
GTCTTTGCCG GCAGCTGGTC CGGTGACCTG TACGCCGTCG ATGCTGTGAC CGGTGACACG
CAGTGGACGT TCGAGACCGG GAGTCACGTG TACGGTCCTC CGACGGTCGC TGACGGGACG
GTGTACTTCG GCGGCCGAGG CGGCACACTG TACGCGGTCG CGGCCGACTC CGGCGAGCAG
CGCTGGCGTG TCGACTGTGG CGCGATCAAA TCGGCACCGA CCGTCTCCGG TGGGACCGTC
TACGTCGGCA CCAAAGCCGA GACCGTCCAC GCCGTTGATG CTCACAGCGG TGAGACCGTG
TGGACGTACC AGACGGAGCG ACCGGTCTGG TCGTCGCCCG CTGTGGTGGA TGGATCCGTG
TACGTCGGCT GCTGGGACGA TTCGCTGTAC GCGCTCGACC GGTCTACCGG CGACCTCGAC
TGGCAGTTCG ACACCGAGCG TTCGATTCCC GGATCGGTGG CTGTCAGAGA CGACTCCTTG
TTCGTCGGGA ACAACGCCAA CAACGTGTAC GCACTCGATC CCACCAGCGG GGAGAGTCGC
TGGCAACAGT CACTCAGCGG GTCGGTCCGG ACCGCAGTGG CTGTCCTCGG GGAGACGCTC
ATCGCAGGCT GTGCCGACGG CACACTCACC GCGCTCTCGA CCACGACTGG CCACCGGCGA
TGGTCAGTCG ATGTCGGTAG CAGTATTCAC GCGTCTCCGG CGGTGGCTGC TGGAACCGTC
TATCTCGGGA CGGCGGACGG CGTTTACGCG CTGGCGGGCG ACGAGTGA
 
Protein sequence
MGDREPTLDR VRSPPRRDLS ADLVRSGELI DRGGNALVSV AALSDERSPD RIAVKEPLAP 
GTLENDEIER FLSQAETWET VDRIERERPR WRDSEHVVGV VDTGERLPWI AMEYMDGGTL
ADRLAAVDGG LPTLEVLWIG ECVCRGVAVA HSLGIAHLDL KPANVLFRST PDGVWDVPKV
ADWGLARVLA DQTGTVEGLS PAYAAPEQFE PGEFGEPDTL TDIYQVGTIL YELLTGTPIA
PESRFQAMQV AMSSDPVSPP SAERPALSPA VDAVVSSALE RDKTDRYSAI PVMADALRAV
RTGGDLPPIV GDRLDGRSER TGDARPERTD TSTPPAPERD DERAATNDGG AGDPELVERV
TDYDNYGSYS ASPGDHDGVT TGRSDGHADD EASSDDPRTH PASESESMAD RVAAYENHRS
VNASPGDHTA VAAESTNGAR EPRAASGLPP RTAGWPTLGG NFARTGTSGD PDGPESAVSV
AWTHSTPDLV KVAPAVSDGI VYAGPERGTL RALDAQTGET VWTSGRLLET ASAPAVADGQ
VFAGSWSGDL YAVDAVTGDT QWTFETGSHV YGPPTVADGT VYFGGRGGTL YAVAADSGEQ
RWRVDCGAIK SAPTVSGGTV YVGTKAETVH AVDAHSGETV WTYQTERPVW SSPAVVDGSV
YVGCWDDSLY ALDRSTGDLD WQFDTERSIP GSVAVRDDSL FVGNNANNVY ALDPTSGESR
WQQSLSGSVR TAVAVLGETL IAGCADGTLT ALSTTTGHRR WSVDVGSSIH ASPAVAAGTV
YLGTADGVYA LAGDE