Gene Hmuk_3264 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_3264 
Symbol 
ID8409342 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013201 
Strand
Start bp64664 
End bp67174 
Gene Length2511 bp 
Protein Length836 aa 
Translation table11 
GC content60% 
IMG OID645018201 
ProductNitrate reductase 
Protein accessionYP_003175722 
Protein GI257372948 
COG category[C] Energy production and conversion 
COG ID[COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0520925 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGACC AAGAGTTCAC GGCGTCCCGC CGGGACGTTC TGAAGAGCGG TGTCGTCGCC 
GCAGTCGGAC TCGGCGGCGC TGACAGCGTT CTCTCGACGC TCCAGCCCGC CGACGACTCG
GGAGAAGCTG CCAGTCAGGT CACCAGCTTC CTCGGAGAAG ATCAAGTCGT AAAGACCGCC
TGTTCGCCGA ACTGCCGCGG GAAGTGTCCG CTGGACGTTT ACATTCGGGA TGGGCAGGTG
AAGAAAGTCG AGCAGCAGGT GCCCGCTGCA ACTGAGTTCA AGCGTGGCTG TACGCTGGGC
ATTTCACACT TACAGCGGGT GTACAACGCG AAGCGGTTGA AGTACCCGAT GAAACGCGCC
AGCTGGTCGC CGGATACCCC CCAGCCCGAC AAGCGTGGTG AAGACGCAGA CTTCAAGCGA
ATCAGTTGGG ACGAGGCACT TGACCTAGTG GCTGAACAGA TACGGACCAC CAAGGACGAA
CACGGGACGG AAGGCATTTT TTGGCACTCC GGATCGGGTG ACGGTGGGAC GACTGGCTTC
GGTCGCCTGA AACAACTGGT TGGTGGCATT CAGGACAGCT TCGTCTTCGG GATCGACACT
AACGTCGGCC AGGGCTTCAA CCGAGTCACC GGCGAAGGTG GCGTCTTCAT GCCACCGACG
AATACCGCTG AAGACTGGGT CAACGCCAGG ACGATCATCA TCTGGGGGTC GGACATCTTC
GCGAGTCAGT TCCAGATGGA CGCCGAGTGG GTCCTCGAAG CCAAGCGCAA CGGCGCGAAG
CTTGTCGTCG TCGACCCCAT GTACACGAAC ACGGCGGAGA AATCGGACCT CTGGTTACCG
ATCCGCCCGG GAAAAGACAC GCACCTCGCT CTCTCGATGA TGCACTACAT CTTCGAGAAC
GAGGTTTACG ACGAGTCCTT CCTCCGGCAG CGGACGAACG CACCAGCACT CGTCCGCACT
GACGACGGAA CACTCCTTGA CCCAAGCCGG GTCGTCGACG ATCCTGCCGA TGACGCAGTC
GTCGTGATGA ACGAGGAAAC TGGCGAGCCA GAGGTTGTCG GCGCTGAAAC TGGTGGTCCG
TTCGCGCTCA CGGGCGAGTG GTCCATCGAT GGGACGACCG TCCGACCCGG CCTGGTTGCG
CTCCGTGAAC AAGCCGCGAA CTATCCCCCG GACAAGGTAG CCGATATCGC CGGACTGACC
GCTGAAGACA TCGAGACGGC AGCCGACTGG TTAGCTACTC GTGGCGCAGG CGGAATTATG
CCGAGTTACG GTGTTGGCCG GTACCTGTAC GGACACGTGT TTGGGCAGGC CTACGCGACG
CTACTGGCAC TGACCGGCGA CTACGGCCGT CACGGAAACA TCCACGCACA GCACCCGTCG
TACAACGGCT CTTACCTTCA GAAAGGCGAT TGGGGAAGTC CAGACGATGC GGTCGGTGTC
GAAACGTATG GGTACCAACG CGTCCTCGAT CTGCTTGAGG ACGGCGGCCC CGCCCAACCC
AGGTTCCTCT ACGGAATGAA CTCGAATATG CTCGGGAACC AGTTCCCGGA TAGGGACCGC
TGGCTGAACG CGATGGAGAA TCTCGACACC ATCGTGTGGG CGGACATGTA CCACACGCCG
ACGACTCAGC AAGCGGATAT TATCTTGCCG GCCGCTCACT GGTTCGAAAC TGAGGACTTG
CTCACGACGT ACACCCACCC CAATCTCAGT TACCGGCAGC AGGCCCACGA ACCACTCTGG
GAGGCCCGTG ACGACTACTA CATCATAGCT GGGTTAGCCG AGCGACTCGA CCACGGAGAC
AAATTCCCCG ATGACAAACA CGAAGTACTC GACCAGTTCG TACAAAACGA CGACCGCCTC
TCCTGGGAAC AACTTCAAGA GACCGGAACG GTCGCCACTG ACGAAACCCC GGATGTCGCG
TACACCGATG AGTTTGGAAC GGAATCCGGT CGGATCACGG TGTACGACGA CGACGCGCCA
ACTGAGAAGG GGCCGGGACT GCCCGACGAG GGGGTCTCGC TTGAAGTTCC GGAACCATTA
GAAGCCAGAA CCGACGAGGA CTGGGAGAAA CAAGATGAGT ACCCACTGGT GTTCATGCAA
AAACACTCGA AGTGGCGGAT CCACTCCCAG TGGGCCAATG TCCCATGGCT CAGAGAGGTC
AACCGGGAGC CACAGTTGGA CATTCATCCG AAAGATGCCA AGCGCAGAGG GATTTCGGAT
GGAGACTACG TGCGCGTCCA CAACGACCGT GGCTCGGTGG TTGTCCGTGC GAAGTACAAC
AAGGGGATTC GTCCTGGACT TGTGAACACG GACCAGGGAT GGTGGGCCGA GGACTTCGTT
GAAGGGCACT ACCAGGACCC GATCTCCGCG GAGACTGCAA AAGTCGGACG CACGTTCGCC
TTCTACGATT GCAGAGTAGA AGTCGAACCC GCAGCTGATG AGTACCAGTC CAACCAGTAC
ACGCAGGACA ATCCACACGG TACGGCTGGC AGCTCGGCCG GAGGTGATTG A
 
Protein sequence
MTDQEFTASR RDVLKSGVVA AVGLGGADSV LSTLQPADDS GEAASQVTSF LGEDQVVKTA 
CSPNCRGKCP LDVYIRDGQV KKVEQQVPAA TEFKRGCTLG ISHLQRVYNA KRLKYPMKRA
SWSPDTPQPD KRGEDADFKR ISWDEALDLV AEQIRTTKDE HGTEGIFWHS GSGDGGTTGF
GRLKQLVGGI QDSFVFGIDT NVGQGFNRVT GEGGVFMPPT NTAEDWVNAR TIIIWGSDIF
ASQFQMDAEW VLEAKRNGAK LVVVDPMYTN TAEKSDLWLP IRPGKDTHLA LSMMHYIFEN
EVYDESFLRQ RTNAPALVRT DDGTLLDPSR VVDDPADDAV VVMNEETGEP EVVGAETGGP
FALTGEWSID GTTVRPGLVA LREQAANYPP DKVADIAGLT AEDIETAADW LATRGAGGIM
PSYGVGRYLY GHVFGQAYAT LLALTGDYGR HGNIHAQHPS YNGSYLQKGD WGSPDDAVGV
ETYGYQRVLD LLEDGGPAQP RFLYGMNSNM LGNQFPDRDR WLNAMENLDT IVWADMYHTP
TTQQADIILP AAHWFETEDL LTTYTHPNLS YRQQAHEPLW EARDDYYIIA GLAERLDHGD
KFPDDKHEVL DQFVQNDDRL SWEQLQETGT VATDETPDVA YTDEFGTESG RITVYDDDAP
TEKGPGLPDE GVSLEVPEPL EARTDEDWEK QDEYPLVFMQ KHSKWRIHSQ WANVPWLREV
NREPQLDIHP KDAKRRGISD GDYVRVHNDR GSVVVRAKYN KGIRPGLVNT DQGWWAEDFV
EGHYQDPISA ETAKVGRTFA FYDCRVEVEP AADEYQSNQY TQDNPHGTAG SSAGGD