| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hmuk_3237 |
|---|
| Symbol | |
|---|
| ID | 8409315 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halomicrobium mukohataei DSM 12286 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013201 |
|---|
| Strand | + |
|---|
| Start bp | 26651 |
|---|
| End bp | 27205 |
|---|
| Gene Length | 555 bp |
|---|
| Protein Length | 184 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 645018176 |
|---|
| Product | regulatory protein GntR HTH |
|---|
| Protein accession | YP_003175697 |
|---|
| Protein GI | 257372923 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2512] Uncharacterized membrane-associated protein/domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.00899856 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGACG AGAGCCGCGA CCGCCGAGCG CTCGTCGCCG CCGGGATCTT CGTCGCCGCG
ACGGCTGTGA CGGTCGCGAT AGCCGCCCGC CTCGTCACGC CGCCGTCGAT CACGGTCGCG
ATGGGAGACG CCACCGTGCG GGCCGGGAGG GTGGGTCCGT CGCTTCGTCC CGGCGACGCG
ATCGCACTCA CGGTCGCGGC GTTCGCCGCT GGTGCGAGTG CGACCGTCCT CCTCGTCGAC
GGCGAGCCTG TGTCGCCAGC GGACCGACCC GTCACAGAGC CCGACGACCC AGCCGACAGC
GAGCAGACAG CGCCCTCGGA GCTGCTTGCG GCCCGGCGGA GCGAGTGGGA AGAGATAGCA
GACCGTCTCG CGAACAACGA GCGGCTCGTC TACGAGGCCG TACTCGACGC CGACGGCGTG
CTCCCACAGA GCGAGATCGT CGAGCGGACG GACGTGTCGA AAGCGACCGT CAGCCGGGCG
CTGGACAACC TCGAAGCGAG GGACCTCATC GAGCGCAAGC GCCGCGGGAT GGGGAACGTC
GTCGTCCTCT CGTGA
|
|---|
| Protein sequence | MSDESRDRRA LVAAGIFVAA TAVTVAIAAR LVTPPSITVA MGDATVRAGR VGPSLRPGDA
IALTVAAFAA GASATVLLVD GEPVSPADRP VTEPDDPADS EQTAPSELLA ARRSEWEEIA
DRLANNERLV YEAVLDADGV LPQSEIVERT DVSKATVSRA LDNLEARDLI ERKRRGMGNV
VVLS
|
|---|
| |