| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_R0056 |
|---|
| Symbol | |
|---|
| ID | 8381799 |
|---|
| Type | rRNA |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jonesia denitrificans DSM 20603 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013174 |
|---|
| Strand | - |
|---|
| Start bp | 1853496 |
|---|
| End bp | 1856599 |
|---|
| Gene Length | 3104 bp |
|---|
| Protein Length | |
|---|
| Translation table | |
|---|
| GC content | 55% |
|---|
| IMG OID | 645004470 |
|---|
| Product | 23S ribosomal RNA |
|---|
| Protein accession | |
|---|
| Protein GI | |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.260476 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTTAGTGTTT TAGAGCACAT GGTGGATGCC TTGGCATCAG GAGCCGATGA AGGACGTGGT
AGCCTGCGTT AAGCCTCGGG GAGTTGGCAA ACAAGCTGTG ATCCGAGGGT GTCCGAATGG
GGAAACCTAC CTGGAGTTAT GTTCAGGTGC CGTCGTTTGA ATGTATAGGA CGATGGGTGG
GAACGTCGGG AAGTGAAACA TCTTAGTACC GACAGGAAGA GATATTCCGT GAGTATTGGC
GAGAGAAAGC GGATGAGGCT AAACCGTGCG TGTGTGATAC CCGGCAGGGG TTGCGCGTAT
CGGGGTTGTG GGACCTTTCG TTTCTAGTCT GCCGGCTAGT TGCAAAGTGA GAAAGTCATT
GTGTAGGTGA AGCTGGTGGG AAACAGCGGC GTAGAGGGTG AGACCCCCGT AACTGAAACA
TGGTGGCCTT TGTGTGGAGT GTTCCCAAGT AGCACGGGGC TCGAGGAATC TCGTGTGAAT
CTGGCAAGAC CACTTGCTAA GCCTAAATAC TCCCTGATGA CCGATAGCGG ATAGTACCGT
GAGGGAATGG TGAAAAGTAG CCCGGGAGGG CAGTGAAATA GTACCTGAAA CCATGTGCTT
ACAATCCGTC GGAGCCTCCT TGGTTGGGGT GACGGCGTGC CTTTTGAAGA ATGAGCCTGC
GAGTTAGTGC TCAGTGGCGA GGTTAACCTG TTGGAGGGTA GCCGTAGCGA AAGCGAGTCT
GAATAGGGCG TTTTTAGTCG CTGGGTCTAG ACCCGAAGCG AAGTGATCTA CCCATGGGCA
GGTTGAAGCG CGGGTAAGAC CGTGTGGAGG ACCGAACCCA CCTAGGTTGA AAACTGGGGG
GATGACCTGT GGGTAGGGGT GAAAGGCCAA TCAAACTTCG TGATAGCTGG TTCTCCCCGA
AATGCATTTA GGTGCAGCCT TACGTGTTGC TTGCCGGAGG TAGAGCTACT GGATAGCCGA
TGGGCCCCAC CGGGTTACTG ACGTTAGCCA AACTCCGAAT GCCGGTAAGT GTAAGCGTAG
GAGTGAGACT GCGGGGGATA AGCTTCGTAG TCGAGAGGGA AACAGCCCAG ACCACCAGCT
AAGGCCCCTA AGCGTGTGCT AAGTGGGAAA GGATGTGTGA TTGCCCAGAC AACCAGGAGG
TTGGCTTAGA AGCAGCCACC CTTGAAAGAG TGCGTAATAG CTCACTGGTC AAGTGATCGC
GCGCCGACAA TGTAGCGGGG CTCAAGTACA CCGCCGAAGC TGTGGCATGA CATCCCTTTG
TGGGTGTTGT GGGTAGGGGA GCGTCGTGTA GATGGTGAAG CTGCCGGGTG ACCGAGTGGT
GGAGACTACA CGAGTGAGAA TGCAGGCATG AGTAGCGAAA GGCGGGTGAG AAACCCGTCC
GCCGAATGAT CAAGGGTTCC AGGGTCAAGC TTATCTGCCC TGGGTTAGTC GGGACCTAAG
GCGAGGCCGA CAGGCGTAGT CGATGGATAA CGGGTTGATA TTCCCGTACC GGCGAAGCAC
CGCCCAACAC AAAACCATAA TGATCGTTGC ACCACGGGCA TTGATGCTGT GGGATTCCCC
TTGTGGGGGT TCTATGGTGT TGGTGTGTTG TGCTGGGACG TGAGTGTGGT GGCGTGAGCG
TATTAACAGG GGTGACGCAG GAAGGTAGCC AAACCGTCGC GATGGTTGAC GACGGCCAAG
ACTGTAGCAC GGGTATTAGG TAAATCCGGT ACCCATGAAG GTGTGAGAGT TGATGGGGTT
AAGTTGGTGA TCCTCTGCTG CCTAGAAAAA CCTCGACGCG AGGTGTTAGC CGCCCGTACC
CGAAACCGAC ACAGGTGATC AGGTAGAGAA TACTAAGGCG ACGAGAGAAT CATGGTTAAG
GAACTCGGCA AAATGCCCCC GTAACTTCGG GAGAAGGGGG GCCTGCCCCG TTGCCAGCCC
GTGCGGTTGG TGTAAGCGGG TGTAGGCCGC AGAGACCAGA GAGAAGCGAC TGTTTACTAA
AAACACAGGT CCGTGCGAAG ACGTAAGTCG ATGTATACGG ACTGACGCCT GCCCGGTGCT
GGAAGGTTAA GAGGATCGGT TAACCACCTT TGGTGGTGAC GCTGAGAATT TAAGCCCCAG
TAAACGGCGG TGGTAACTAT AACCATCCTA AGGTAGCGAA ATTCCTTGTC GGGTAAGTTC
CGACCTGCAC GAATGGCGTA ACGACTTCTC TGCTGTCTCA ACCATGAACT CGGCGAAATT
GCATTACGAG TAAAGATGCT CGTTACGCGC AGCAGGACGG AAAGACCCCG GGACCTTTAC
TATAGCTTGG TATTGGTGTT CGCTTCAGTT TGTGTAGGAT AGGTGGGAGA CTAGGAAACC
CGCGCGCCAG CGTGGGTGGA GTCAACGTTG AAATACCACT CTGATTGAAT CGGATACCTT
AACCTCGGAC CCTGATCGGG TCCAGGGACA GTGCCTGGTG GGTAGTTTAA CTGGGGCGGT
TGCCTCCTAA AGAGTAACGG AGGCGCTCAA AGGTTCCCTC AACCTGGTTG GCAATCAGGT
GGCGAGTGTA AGTGCACAAG GGAGCTTGAC TGCGAGACTG ACAGGTCAAG CAGGGACGAA
AGTCGGAACT AGTGATCCGG CCATGGCTTG TGGAAGCGTG GTCGCTCAAC GGATAAAAGG
TACCCCGGGG ATAACAGGCT GATCTTGCCC AAGAGTCCAT ATCGACGGCA TGGTTTGGCA
CCTCGATGTC GGCTCGTCGC ATCCTGGGGC TGGAGTAGGT CCCAAGGGTT GGGCTGTTCG
CCCATTAAAG CGGTACGCGA GCTGGGTTTA GAACGTCGTG AGACAGTTCG GTCCCTATCC
GCTGCGCGCG CAGGAAACGT GAGAAGACCT GTCCCTAGTA CGAGAGGACC GGGACGGACG
AACCTCTGGT GTGCCAGTTG TACCGCCAGG TGCACGGCTG GTTAGCTACG TTCGGAAGGG
ATAACCGCTG AAAGCATCTA AGCGGGAAGC CTGCTTCAAG ATAACGTTTC CAACAACCAC
TTGGTTGTGA AGGCACCCAC CAGACCAGTG GGTTGATAGG CCGGACGTGG ACACGCAGTA
ATGCGCGGAG CTGACCGGTA CTAATACGCC AACCACTAAC ACAC
|
|---|
| Protein sequence | |
|---|
| |