| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_2554 |
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| Symbol | |
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| ID | 8381707 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | - |
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| Start bp | 2746962 |
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| End bp | 2747462 |
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| Gene Length | 501 bp |
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| Protein Length | 166 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 645005319 |
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| Product | single-stranded nucleic acid binding R3H domain protein |
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| Protein accession | YP_003162489 |
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| Protein GI | 256833762 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1847] Predicted RNA-binding protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.000217074 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.328079 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGATCAG GAACCCAACT TGATCGCAAG CGCATTACTC AACTCGAGGA AGAGGGAGAC
GTCGCGGCCG ACTATCTCGA AGAGATTCTT GACATCGCCG ACCTTGACGG GGATATCGAA
ATCGATGTGG AACACGATCG GGCATCTGTC GCGATCATTG CAGAGGACGA CTCGTCGATC
CGACCGCTTG TTGGTCGTGA CGGTGAAGTG CTTGAGGCTT TGCAAGAGCT CACACGTCTC
GCTGTACAAA CGAAAACAGG GGAGCGTAGT CGGTTAATGC TCGACATTGC CGGATACCGA
GCATCGCGTC GTACTGAACT CACAAAACTT GCTCAAGACG CCATTGCGAA AGTGAGGTCA
ACGGGCCGAG CTGTAGCGCT TGAGCCACTC AACGCATTTG AACGGAAAGT CGTGCACGAC
GTTGTCACAG AAGCTGGTCT AACCAGCGAG TCACACGGAG TGGACCCCGA CCGCTACATC
GAAATTTCAC CAGCACAGTA A
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| Protein sequence | MGSGTQLDRK RITQLEEEGD VAADYLEEIL DIADLDGDIE IDVEHDRASV AIIAEDDSSI
RPLVGRDGEV LEALQELTRL AVQTKTGERS RLMLDIAGYR ASRRTELTKL AQDAIAKVRS
TGRAVALEPL NAFERKVVHD VVTEAGLTSE SHGVDPDRYI EISPAQ
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