Gene Jden_2551 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_2551 
Symbol 
ID8381704 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp2743815 
End bp2744954 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content58% 
IMG OID645005316 
ProductparB-like partition protein 
Protein accessionYP_003162486 
Protein GI256833759 
COG category[K] Transcription 
COG ID[COG1475] Predicted transcriptional regulators 
TIGRFAM ID[TIGR00180] ParB-like partition proteins 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00820425 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.388314 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAGA AGAAGCGTGG TTTGGGGCGC GGGCTAGGGG CTCTCATTCC CACCAGCGGG 
GACAACGATA GACCAGTTGA CGTATTCTTC CCCGATAACC GGTCACCACA AGAAGCGGCG
GCAACGAAGC CAAGCTTGTT GTCGCACGGC GCTCGCGAAG TGCTGCAAGC TCCGCCACGT
CGCAGAACCT CCACTGACAC GCCGGACAAT GCCAGCGCGG TTCCTCCCGT GGGAGATCAA
CCACGTGCAC GGCAGGGGGG AACGAGACGT CACACAGCGC CGGAATCTGA ACTTGTTCCC
GTGCCCGGTG CACGGTTCGC TGAGATCCCC ACTGACGCCA TCACACCGAA CCCCCGCCAA
CCTCGTGTGA ACTTTGATGA AGGTGAACTC GACGAGCTTG TCGGATCCAT CCGGGAAATT
GGTGTGCTGC AGCCGGTTGT CGTTCGGCAA AAGTCTGAGG GCGACTACGA GCTCATCATG
GGGGAACGTC GCTGGCGTGC CACACGTGAA GCAGGATTAG ACACAATCCC GGCGATTATC
CGGGACACAG ATGATTCTGC GATGTTGCGT GACGCACTCC TCGAAAACCT CCATCGGAGT
GCGCTCAATC CCTTAGAAGA GGCAGCTGCT TACCGCCAAT TACTGGACGA TTTCGAATGC
ACACACGAAG AATTGGCCAC CAGGATTTCC CGGTCGCGTC CCCAGATCTC CAACACGTTG
CGGCTCTTGA ACCTGCCGCC TCTTGTCCAG CGTCGTGTCG CTGCGGGAGT GTTGAGTGCA
GGGCATGCAC GTGCCCTTCT TGGCCTTTCT CAAACAGCAG ACATGGAGAA ACTGGCACAA
CGTATTGTGT CGGAGGGTTT GTCCGTCCGT GCGACAGAAG AAGCTGTCAC GATGTCTGCA
GGTGGGGACA CGAAAAAGCC AGTACGCCGG GCTTCTGTCC CCAACGAAGT TGCGGAGTCA
CTCTCGTCAC GGTTGTCCGA CCGTTTTGAT ACCCGGGTGA AAGTGAACCT AGGAAAGACG
AAGGGACGCC TCACAGTGGA GTTTGCGACA TTGGAAGACC TCGATCGAAT TTTGGAGATG
ATGGCTCCAG AAGTTGGTGG CGTGTCACCG GCAGGTTCCG CAACGCAATC AGCACAATAA
 
Protein sequence
MSEKKRGLGR GLGALIPTSG DNDRPVDVFF PDNRSPQEAA ATKPSLLSHG AREVLQAPPR 
RRTSTDTPDN ASAVPPVGDQ PRARQGGTRR HTAPESELVP VPGARFAEIP TDAITPNPRQ
PRVNFDEGEL DELVGSIREI GVLQPVVVRQ KSEGDYELIM GERRWRATRE AGLDTIPAII
RDTDDSAMLR DALLENLHRS ALNPLEEAAA YRQLLDDFEC THEELATRIS RSRPQISNTL
RLLNLPPLVQ RRVAAGVLSA GHARALLGLS QTADMEKLAQ RIVSEGLSVR ATEEAVTMSA
GGDTKKPVRR ASVPNEVAES LSSRLSDRFD TRVKVNLGKT KGRLTVEFAT LEDLDRILEM
MAPEVGGVSP AGSATQSAQ