| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_2550 |
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| Symbol | |
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| ID | 8381703 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 2742648 |
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| End bp | 2743607 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 645005315 |
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| Product | D-alanine--D-alanine ligase |
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| Protein accession | YP_003162485 |
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| Protein GI | 256833758 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
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| TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.352521 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.520823 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTCTC ACCCTTTTGT TGTCATTCTT GCTGGCGGGC TTTCCCATGA ACGTGACGTG
TCTCTACGCT CGGGACGCCG GGTTGCTGAG GCGTTACGCA GCACCGGTAT GACTGTTTCT
GTTGTTGATG TGGACGCCCA GTTGCTTCCT CGTCTTCAGT CTCATCGTCC CGATTTGGTG
TGGCCGTTGC TCCATGGGGC TAGTGGTGAG GACGGGTCAA TCCGTGACGT TCTTGAGCTT
CTCGATTTGC CGTATTTGGG CACTCGCCCA CGGGAGTCAC GTGTTGCCTG GAATAAACCA
GTGGCAAAGG CCGTCTTGGC TGCTGCTGGT GTCCTCACGC CCTCGTACGT GACTTTGCCT
CAGAGTTTGT TTCGTGAACT TGGTGCACGC TCTGTCATGG AGCCGGTCAC TGCCAAGCTT
GGACTACCGT TGGTGGTGAA GCCTGCTCAA GGTGGCTCCG CGTTGGGTGT CACCTTGGTG
ACGTCTGCGG AGCAGCTTCC GCAAGCACTG GTTGATTGTT TTGCGTACGG CGATCTTGCT
CTCATTGAAG AGGCAATTAC AGGTACTGAG GTGTCGGTGT CGGTCGTCGA GTCGCCGGAT
GTGACGGCGC TCCCCGCCGT GGAAATCATC ACTGACGGTC CTTATGATTA CGATGCTCGG
TATAACCCAG GTCGCACCCA GTATTTTACG CCTGCTCGTT TGGACCCAGA AATTGCCGAT
GCGGCCGCCC GTGTTGCGTT GACCGCACAC ACGACGTTGG GGTTACGGCA TGTGTCACGC
TCGGACCTCA TTATTGATGG TAAGGGTCAG GTCTGGTTCC TTGAGGTGAA TGTGGCGCCG
GGGATGACGG AGACGTCGCT TCTTCCTCAA GCTGTTGTTG CTTCTGGACA GTCTCTTCCT
GACGCTTACT CGTCGTGGGT TCGTGCTGCG TTGGTTGTTG CTGATTCGGC GGCGCAGTAG
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| Protein sequence | MSSHPFVVIL AGGLSHERDV SLRSGRRVAE ALRSTGMTVS VVDVDAQLLP RLQSHRPDLV
WPLLHGASGE DGSIRDVLEL LDLPYLGTRP RESRVAWNKP VAKAVLAAAG VLTPSYVTLP
QSLFRELGAR SVMEPVTAKL GLPLVVKPAQ GGSALGVTLV TSAEQLPQAL VDCFAYGDLA
LIEEAITGTE VSVSVVESPD VTALPAVEII TDGPYDYDAR YNPGRTQYFT PARLDPEIAD
AAARVALTAH TTLGLRHVSR SDLIIDGKGQ VWFLEVNVAP GMTETSLLPQ AVVASGQSLP
DAYSSWVRAA LVVADSAAQ
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