Gene Jden_2548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_2548 
Symbol 
ID8381701 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp2740852 
End bp2741181 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content58% 
IMG OID645005313 
Productthioredoxin 
Protein accessionYP_003162483 
Protein GI256833756 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3118] Thioredoxin domain-containing protein 
TIGRFAM ID[TIGR01068] thioredoxin 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.543523 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.158534 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACACA CTGTTGCCGT CACCGACGCA ACCTTCGACA CCGCAGTTCT CCAGTCCGAC 
ATTCCAGTGC TCGTCGACTT TTGGGCGGAA TGGTGCGGGC CATGCCGCCA AGTGGCACCC
ATCCTTGAAG AGCTGGCTGA AGAATACGCG GGTCGCATCA CCATCGCGAA ACTCGACACT
GATGCCAACC CAGCCACCAC GATGAAATAC GGCATCGTGT CCATCCCTAC CTTGAACATC
TACAAGGGCG GAGAAGTCGT CGCGACCATT GTGGGTGGAC GGCCACGTCG TCAACTCGCC
CAAGAGATCG ACGCTGTCCT CGCCCAGTAG
 
Protein sequence
MSHTVAVTDA TFDTAVLQSD IPVLVDFWAE WCGPCRQVAP ILEELAEEYA GRITIAKLDT 
DANPATTMKY GIVSIPTLNI YKGGEVVATI VGGRPRRQLA QEIDAVLAQ