Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_2543 |
Symbol | |
ID | 8381696 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | + |
Start bp | 2733261 |
End bp | 2733881 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 645005308 |
Product | NUDIX hydrolase |
Protein accession | YP_003162478 |
Protein GI | 256833751 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1051] ADP-ribose pyrophosphatase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.339179 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCACCA ACGAGCGCCC AGATGACCGA TTAACGGTCC CTGCGCCGCC TGGTGGCCAC CCCTTGAGGA TAGACCCCAA CGCCCGGCGC CACTTCCCGG TGTATCACAG CCCACACCAC GCGCAGTCCT CGGATCTGCC CGTTGTGGAG GAAACCTCCG CTGGTGGATT AGTTGTCGCA ATCATGGGAA CCTCGTTCCA TGCTGCGGTC ATCGCACGCA GGAACCGTGC GGGACGCTTG GAATGGTGCC TCCCCAAAGG GCATTTAGAG GGTGTGGAGA CCGCAGAGGA AGCTGCGGTG CGTGAAATCC ATGAAGAAAC AGGGATCATG GGTGTGGTGC GTCGCGCATT GGGGTCGATT GATTATTGGT TTACCGGTGA TGATCGTCGG GTCCACAAGG TTGTTCATCA TTACTTGTTG GATGCTGTGG GGGGGTTCCT TACAGTGGAG GGTGACCCGG ATTCTGAGGC GGAAGATGTG GAGTGGGTCT CGTTTGCTGA CCTGCAAACA CGTCTCAGTT ACCCTAATGA GCGGCGTCTT GCCGCGATGG CGCATGAGAT TCTTCTTAAG CGTCGCCTAA ATGATTCGCG GCCGCTGCCC CGGTTCCGTC CCCACCGGTG A
|
Protein sequence | MSTNERPDDR LTVPAPPGGH PLRIDPNARR HFPVYHSPHH AQSSDLPVVE ETSAGGLVVA IMGTSFHAAV IARRNRAGRL EWCLPKGHLE GVETAEEAAV REIHEETGIM GVVRRALGSI DYWFTGDDRR VHKVVHHYLL DAVGGFLTVE GDPDSEAEDV EWVSFADLQT RLSYPNERRL AAMAHEILLK RRLNDSRPLP RFRPHR
|
| |