Gene Jden_2536 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_2536 
Symbol 
ID8381689 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp2722482 
End bp2723501 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content58% 
IMG OID645005301 
Productglycosyl transferase family 2 
Protein accessionYP_003162471 
Protein GI256833744 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.157412 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCCA CGTTGTTAAC CCTGGTTGTT CCCGCCTATA ACTCGGCACC CTACCTGCAC 
CGGTGCATTG ATTCACTCCT TGGTGAAGAC CGTGTTGAGG TCGTGATTGT CAACGATGGA
TCCACCGATG ACACTGCTGC AATCGCTGAC GCCTACGCAT TCGCACACCC CCAGGTCGTG
CGGGTCATCC ACCAGGTCAA CGCCGGCCAC GGTGGTGCAG TGAACGCAGG AATCGCCGCC
GCACGCGGCG AGTATGTCAA GGTTGTTGAC TCCGATGACT GGCTCAACCG TGATGCTCTA
CGCGCCTTAC TATCAACGAT CGTGGAGCAA GAGTCGCGTG GGGTGCGCAT CGACGCGTTT
ATCACGAACT TCGTCAAGGA ACGCGAGGGA GCACGTCACT GTCCGGCCAC GCGGTACACC
AATGTGATGC CGCAGGGCCG TCCATTTGGG TGGTCAGAAG TGGGCGCTTT CCGTACCCGA
CAACACCTCA TGATGCATGC CGTGTGTTTC CGCACTGAGG TGATTCGCGC ATCCGGATTG
CAACTCCCTG AGCACACGTT CTATGTGGAT AATCTGTTTG TTTTTGTGCC GCTGATCCAC
ACCCGCACGG TGTACTACCT CAATGTTGAT CTGTACCGGT ACTTTATTGG CCGCGACGAC
CAATCAGTAG CTCACGACGT GATGATTCGC CGCTCCGATC AGCACGTGAA AGTCACTCGC
CTCCTTCTTG ATGCCATGCC GGCACGTGGA AGCGTGGATA CTCAACTGTT CTCCTACCTC
ATCCACCACC TGGAAGTGGT CTGTGCCATC ACGTCGATCG TGCTTCTGCA CGCCGGTGGG
CGAGAGAATC TCGCCACGCG CACAGCGTTG TGGAATGACA TTCGCGCCAA AGACGCCTGG
CTGCATGCCC GGTTGCGCCG GTCCCTGGTG GGGACCACAA GTAACCTACC CGGGTCCGCA
GGCCGGAAAA TTTCGGTGGC CGCGTATCAC ATCGCCCGGC GGGTAGTCGG GTTCAGTTAG
 
Protein sequence
MSATLLTLVV PAYNSAPYLH RCIDSLLGED RVEVVIVNDG STDDTAAIAD AYAFAHPQVV 
RVIHQVNAGH GGAVNAGIAA ARGEYVKVVD SDDWLNRDAL RALLSTIVEQ ESRGVRIDAF
ITNFVKEREG ARHCPATRYT NVMPQGRPFG WSEVGAFRTR QHLMMHAVCF RTEVIRASGL
QLPEHTFYVD NLFVFVPLIH TRTVYYLNVD LYRYFIGRDD QSVAHDVMIR RSDQHVKVTR
LLLDAMPARG SVDTQLFSYL IHHLEVVCAI TSIVLLHAGG RENLATRTAL WNDIRAKDAW
LHARLRRSLV GTTSNLPGSA GRKISVAAYH IARRVVGFS