Gene Jden_2533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_2533 
Symbol 
ID8381686 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp2717789 
End bp2718934 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content56% 
IMG OID645005298 
ProductUDP-galactopyranose mutase 
Protein accessionYP_003162468 
Protein GI256833741 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0562] UDP-galactopyranose mutase 
TIGRFAM ID[TIGR00031] UDP-galactopyranose mutase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGACC TTGTGGTGGT TGGGGCAGGG TTGTATGGGC TGACCGTCGC GGAGCGGTGC 
GCCTCGCAGC ATGGGATGAA CGTGCTGGTC GTTGATAGGC GGCCCCACAT TGGGGGGAAC
GCGTACTCGA GTGTTGACCC TGACACTGGT ATCGAAGTTC ATGAGTACGG TGCGCACTTG
TTCCATACTT CCCACGAGGG TGTCTGGGAG TACGTGAATA GATTCACGAG CTTCACGGAC
TACGTGCATC GCGTCTACAC CACGCATCGG GGCGAGGTAT TTCCCATGCC TATTAATTTG
GGGACGATTA ACCAGTTTTT TCGCTCGGCT TTGAGTCCTG ATGCTGCGCG GGCGTTAGTT
GCTGAGCAGG CTAGTGAGTT GGGCGGGCGG GCACCGCAGA ACCTTGATGA GCAAGGGGTG
TCATTGGTGG GCCGCCCGTT GTATGACGCT TTTATTCGGG GGTATACGGC CAAGCAGTGG
CAGACGGATC CACGTGACCT GCCCGCATCG ATTATTTCTC GGCTACCGGT TCGCTATAAC
TACGACAACC GATACTTCAA TGACACTTAT GAGGGTCTTC CAACTCAGGG GTATACGGCA
TGGTTTGAAC GGATGGTTGA TCATCCGCGT ATTGAGGTGC GCTTGGGCGA AGATTTCCTC
ACCCCACCAG GGCAGGTGAC GAAATCCACC ACGGTGGGAC AGGTTCCTGT TGTGTTCACT
GGTGCTGTGG ATCGATATTT TGACGATGCG GTGGGTGCGT TGTCGTGGCG AACCCTCGAT
TTTGAGCGTG ACGTGGTGAG CACCGGTGAT TTTCAGGGCA CGGCGGTTAT GAACTATGCG
GATACTGATG TTCCGTTCAC GCGCATCCTT GAGTTTCGGC ATTTTCACCC GGAACGCGAT
TATCCTACGG ATCGTAGTGT GATCGTGCGT GAGTTCTCCC GTTTTGCTGG GCGCGATGAT
GAACCGTATT ACCCAGTCAA TGCGACTACT GACCGTGAAC GGTTGAGCGC GTACCGTGAG
TTGGCGCGAG CTGAGCGGGG CGTCCACTTT GGTGGACGTT TAGGGACTTA CCAGTACCTG
GACATGCATA TGGCGATTGC GTCGGCACTG ACCAATGTGG ATCAGGTAGC AGCGCTGCGG
GTTTAG
 
Protein sequence
MTDLVVVGAG LYGLTVAERC ASQHGMNVLV VDRRPHIGGN AYSSVDPDTG IEVHEYGAHL 
FHTSHEGVWE YVNRFTSFTD YVHRVYTTHR GEVFPMPINL GTINQFFRSA LSPDAARALV
AEQASELGGR APQNLDEQGV SLVGRPLYDA FIRGYTAKQW QTDPRDLPAS IISRLPVRYN
YDNRYFNDTY EGLPTQGYTA WFERMVDHPR IEVRLGEDFL TPPGQVTKST TVGQVPVVFT
GAVDRYFDDA VGALSWRTLD FERDVVSTGD FQGTAVMNYA DTDVPFTRIL EFRHFHPERD
YPTDRSVIVR EFSRFAGRDD EPYYPVNATT DRERLSAYRE LARAERGVHF GGRLGTYQYL
DMHMAIASAL TNVDQVAALR V