| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_2513 |
|---|
| Symbol | |
|---|
| ID | 8381666 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jonesia denitrificans DSM 20603 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013174 |
|---|
| Strand | + |
|---|
| Start bp | 2699182 |
|---|
| End bp | 2700456 |
|---|
| Gene Length | 1275 bp |
|---|
| Protein Length | 424 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 645005278 |
|---|
| Product | histidine kinase |
|---|
| Protein accession | YP_003162448 |
|---|
| Protein GI | 256833721 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4585] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0276657 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.73288 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAGCG ATGCGACCCG TGATCGGGAG GTCAGCCGGT GGCGCACTTT GTGGGCGTTG
CCGATTTTCC CGCCCCCACC GTTGTCCCGG TGGGCGCGGG TGTGGCGGTG GTTGTTAGCC
ATTTTTGGCG GGGTCCTCAT GTTCCTCATG GTGTATGGGA CTTTGCTCAG TGCCGCTGAG
TCTGATGTGT TTCCTGAGCT TGAGAATCGC GCTATTGCGT TGCTGATGGT TGCTGATCTT
CTGGTGACCC CGTTGGCTTT TCTGGCGATG GCGCTGCGGC GCAGGTTCCC GTTCTTGGCG
ATTGCTTTAG CTGGGGTTGG GGCGTCGTTG TCGACGTTGG GGTCGATCGC GATCGTCATG
ACAACAATTT CGGTGGCGAC TCGACGCCAG TGGAAAGAGA TTTTGTGTGG TGCGGCAGCG
TGGACGGTGT CAGCGGCGGT TGCGTACGCG TTATGGCCTA CGGGGTTGAT GGGTGGGTTA
CCGTCAACAA CGTTTTCGGT GGCAACGATG TTTGCGATCT GTGTGGCGGT CGGTTTTTAT
GTGGGCGGTC GTCGTGAAAG TCTCGCAACG TTAACTGCAC GGGTGGAGGC TGCGGAGCAA
ACTCGCGATG CGCGTGCTGC GGAAACTCGG GCGAACGAGC GTTCGTTGAT TGCCCGGGAG
ATGCATGACG TGTTAGCTCA CCGGATTTCG TTGGTGGCGT TGCATTCGGG GGCGTTGGCG
TACCGCACTG ATTTGAACCC GGATCAGGTG AGGGAAACTG CTGAGATTAT TCGGGAGAAC
TCTCACCGGG CGTTGACTGA GTTGCGGCAG GTGTTGGGGG TGTTGCGGGA CCCGACTGTC
CCCCTTGATG ACGCACCGGA TGCCCCGCAA CCCCGGTTGA CGGATATTGA TACGGTGATT
CGCGATGCGC GGCTTGCGGG CACCCGGGTG GATCTCGCGT TGGATGGTGA TACCCGTGAT
GCGCTGCCTA CGTTGAGTGA GGCGGTGTCA CGAAATGCGT ATCGTGTGTT GCAGGAGTCG
TTGACGAACG TGCGTAAGCA CGCTCCCCAT GCGTTAGCTC ATGTCACCGT GAAACGGACA
AGTACTGGTG ATCTCCTTAT TGATGTGTGG AATTCGATGC GGGCCGTGTC GGACACCGAG
ATGCCGTCGT CTGGGTTCGG GTTGGTGGGA ATGAGTGAAC GCGTCGAATC TTTTGGGGGA
AGCATCACTT ACGGTCCTAC CGCAGACCAC CGCTTTATTG TCACCGTGAC CTTCCCATGG
GTGGAACAGG AGTAA
|
|---|
| Protein sequence | MSSDATRDRE VSRWRTLWAL PIFPPPPLSR WARVWRWLLA IFGGVLMFLM VYGTLLSAAE
SDVFPELENR AIALLMVADL LVTPLAFLAM ALRRRFPFLA IALAGVGASL STLGSIAIVM
TTISVATRRQ WKEILCGAAA WTVSAAVAYA LWPTGLMGGL PSTTFSVATM FAICVAVGFY
VGGRRESLAT LTARVEAAEQ TRDARAAETR ANERSLIARE MHDVLAHRIS LVALHSGALA
YRTDLNPDQV RETAEIIREN SHRALTELRQ VLGVLRDPTV PLDDAPDAPQ PRLTDIDTVI
RDARLAGTRV DLALDGDTRD ALPTLSEAVS RNAYRVLQES LTNVRKHAPH ALAHVTVKRT
STGDLLIDVW NSMRAVSDTE MPSSGFGLVG MSERVESFGG SITYGPTADH RFIVTVTFPW
VEQE
|
|---|
| |