Gene Jden_2496 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_2496 
Symbol 
ID8381649 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand- 
Start bp2682069 
End bp2682749 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content57% 
IMG OID645005261 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003162431 
Protein GI256833704 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.40575 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.202338 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCTGCCA TACTGCTCTC TATGAGCAGG GGAGATTCAT CACGGGTCAC ACCGTACGGG 
ACAGGCCTAC GCCGCCGAGC CGACATCATC GACCAAGCGT CCAAACACTT TGCACGCTAC 
GGCTATCATG GTGCCTCCCT GAGAGAAATC GCATCGCGAA CTGGAGTCTC CCACGCCGGG 
CTTCGCTACC ACTTCAGCAC CAAAGAAGAA CTCCTGATGG AAGTCCTCGC CCGACGCGAA 
CGATTCGGAA GCGAACTTGT CGCACTCGAC GAACTCCCAG AAGAACCCAC CACCGAACAA 
GCCTGGTTGC TCGTCGAACG ATTTGTTGAC CTCATGAAAA TGAGCTTCTC TCAACCAGGG 
TTCATCGAAC TCTTCATCAC CCAAGCCGTG TTCGCTGCCC ACGAAGACCA CCCCGCCCAC 
GAATTCTTCC AACGCCGCTA CCGCACCATG CGCGCCGAAT ACACCCAAGG GCTCTCCGCG 
ATCAAAGCAG CCGGACTCCT CAAACCAGGA GTCGAACCCG AATTCGCCGC GACCGCACTC 
ATCGGGTTCC TCGACGGACT GCAAATCCAA TGGCTCCTGG AAAAGAAAGG CGTGGACTAC 
ATGGAGGTGT CACGCCGTTT CATGCGAGCA CTCGTTGCTG ACGAACACCT CGACCAGATC 
GACGACTTCT TCGCAGCCTA A
 
Protein sequence
MPAILLSMSR GDSSRVTPYG TGLRRRADII DQASKHFARY GYHGASLREI ASRTGVSHAG 
LRYHFSTKEE LLMEVLARRE RFGSELVALD ELPEEPTTEQ AWLLVERFVD LMKMSFSQPG 
FIELFITQAV FAAHEDHPAH EFFQRRYRTM RAEYTQGLSA IKAAGLLKPG VEPEFAATAL 
IGFLDGLQIQ WLLEKKGVDY MEVSRRFMRA LVADEHLDQI DDFFAA