Gene Jden_2490 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_2490 
Symbol 
ID8381643 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp2672625 
End bp2673944 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content64% 
IMG OID645005255 
Productprotein of unknown function DUF571 
Protein accessionYP_003162425 
Protein GI256833698 
COG category 
COG ID 
TIGRFAM ID[TIGR02958] secretion protein snm4 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.997634 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.350749 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACATCTT CCCTGCGCAT CACCGTCATT GGCTCCACCC GTCGTGCCAC GGTGGTTGTG 
CCCGCAAGTG AACCGTTCGC TGTGCTCTTG CCAGATATTG TCGACTGTCT GAGTGAACAC
ATTCCACCAG GTCAAGGTTG CGTGTTGGCA ACTCAACTAG GTGAATTGGT TCCACTTGGT
GTGCCCTGCG GGCAATCAGG TGTCCCTGAT GGTGCAACGG TACGACTCGT GTCGCCCACC
CAAGCTCCGG TTCCTCCCGT TGTCGTGGAC GTCACTGATG TTGTCGCGGA GGCAGCTGAT
GAGTCAGAAC ACCTGTGGCG AGCCGAGCAC ACCAGCGTCG CAGCATCGCT TGCATGCGCG
GCCATCATCG TTGCGGTGGG GTGGCCACTG ATGAGCGCGG GGACCGTGTG GCCTGCGGTG
ATGATTACGG CAGGTGCGCT CGCAGCAGCT GTTGGTGCGT CTGTGTTGGC CGATGCGCTT
CCCTCGGCGG CACGGTTACG TCCGTTGCTG GGCGTGGTGG GTGCAGGGTG GGCTGGTGTC
GTGGGTGCTT GTGGTGCGGT GGCCGCAGGG TGGGGTGTTG CTGCGGGTGT GGGGTTGGGG
CTAGCGGTTG CTGTTGTGGC GCATGGCGGG TTGGTGTCGT TGCGTTCTCA GTCCACCGCA
CCTTTGTCTG GCATGGGCGT TGGGGGGTTG TGGGCGGTGC TGGTTGGTGC GTTGAGTGTG
GCGGGGCTGC CAGTAGTGGG GGTGGCAGCC GCCTGCGCGG TGGCATGTGT GGTGGCGTTG
GGGGTCGCCC CGACGGTGGC TCTGGCTGCT GGCGGTGTGA CCGCACTGGA TGATGCGGTG
ATGGGTGGTG ATCACCCTGA TCGTGGTGAG GTTCTTGCTG CCCTTGACGA TGCCTGGTGG
CATATGGCGT GGATGGTCGC GCCGGTGGGC GCCGCTGTGG CGTGGTCGGT GTGGGTGATG
AGTGCGTCTG ATAACACGTG GGCGTGGGCG TTAGCTGGGG TCACAGTGGT GGCGGTGGCG
TTGCGGGCAC GGCATGTGGG GTCGGTTGTG TGTGTGACGG CGTTGTGGGT TGCGTTGGTT
GTCGCGGGGG TTGGTGCTGT GGTGGCCGCA CCGTGGTCTT TGGGAGTCGT GGTAGGTGTC
GCTGTGGTGG CGTTGGCGGC GGTGATAGCG GTGGCAGTGG CCAATCCGGC ACCCCATGCG
CGCGTGGTGG CACGGCGGGT GGGAGATGCA GTGGAGTCGG TGGCGTTGGT GGCGTTGTTT
CCTCTTGCTC TTGGTGTGTG GGGGTTGTAT CTCGTGGTGA TGGGAGTGTT TGCAGCATGA
 
Protein sequence
MTSSLRITVI GSTRRATVVV PASEPFAVLL PDIVDCLSEH IPPGQGCVLA TQLGELVPLG 
VPCGQSGVPD GATVRLVSPT QAPVPPVVVD VTDVVAEAAD ESEHLWRAEH TSVAASLACA
AIIVAVGWPL MSAGTVWPAV MITAGALAAA VGASVLADAL PSAARLRPLL GVVGAGWAGV
VGACGAVAAG WGVAAGVGLG LAVAVVAHGG LVSLRSQSTA PLSGMGVGGL WAVLVGALSV
AGLPVVGVAA ACAVACVVAL GVAPTVALAA GGVTALDDAV MGGDHPDRGE VLAALDDAWW
HMAWMVAPVG AAVAWSVWVM SASDNTWAWA LAGVTVVAVA LRARHVGSVV CVTALWVALV
VAGVGAVVAA PWSLGVVVGV AVVALAAVIA VAVANPAPHA RVVARRVGDA VESVALVALF
PLALGVWGLY LVVMGVFAA