| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_2486 |
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| Symbol | |
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| ID | 8381639 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 2669914 |
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| End bp | 2671302 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 645005251 |
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| Product | protoporphyrinogen oxidase |
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| Protein accession | YP_003162421 |
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| Protein GI | 256833694 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1232] Protoporphyrinogen oxidase |
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| TIGRFAM ID | [TIGR00562] protoporphyrinogen oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.493936 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCTCCG TAACGATCAT TGGCGCTGGA ATTGCTGGTC TCACCGCTGC ACATCACCTT
GCGGTTCGCG GCAACAAGGT CACACTTGTC GATGCGTCAT CCCAGGTGGG TGGATTTCTT
GCGCCGTTGC AGATGAGCGG ACCTCATGGT GACCTTCTTC TCGATGCGGG GGCTGAATCT
TTTGCTACCC GAGCTCCTGC GGTCTCTGCT CTGGTGACGT CTCTCGGTTT GCAGGTGACA
AGCCCTGAGG ATCGGGCTGG GTGGTGTGTT CCGGATCGTT CGTCAGCGTT TCCGCTGCCC
TCAGCTGGGG TGTTGGGTAT CCCCGTCGAC CCGTTTGCCG CCGATGCCCG CGCGGCCCTG
GGGTGGGTTG GATCGGTTCG CGCCTGGGTG GACCGGATCC TTCCGCCGCG GGTGGGTGAC
ACCTCGAACC TGGATGCTTT TGTTCGTTCT CGGATGGGCA ACAAGGTTGC TGACCGGCTT
GTGTCTGCAA TTGTGGGAGG TGTGCATTCC ACGTCACCGA CCCTGTTGGA TGTCTCCGCG
ATTCACCCAA AATTTCGGGA GTACTTTGCC GATGAGGGCA CCCTGACTGG GGTGGTGAAA
CGCATTCGTG CGGCGGCTCC TGCTGGGCGC GCTGTCAGTG GGATCGTCGG TGGGTTGCAC
ACTCTGCCCT CCACTCTTTA TCAGAGTATT TCTGCTGCTG GTGGAACTGT TCTCCTCGAT
GAAGCGGTGA CCGCGTTGAC ACAGCGCGAT GGGCGCTGGG TGGTGCAGGG GACGTCAGGC
CAGGACGTGA GCGTCAGCGA CCACATCATC ATTGCGTTGC CTGCTCGACC GGCACTGGCG
TTGCTCGCTG ACACGGGAAT CTATGACGCT GGTGATCAGC TAAACCAGGT GGCCCGTGGC
ACCGACATTG CGCTGGCCAC TGTGGTTGTG CACTCCAAGC AGCTGGGTTC CTACCCTCGT
GGAACTGGTG TGCTTGTGTC ACCGGACGCT GGGTTCCAAG CGAAAGCTTC CACGCATGCT
AATGCAAAGT GGGGGTGGGT TGATGAGGCT GTCATCAGCG CTTTTGGTCC CGATCATCAT
GTCATTCGGT TGAGTTTTGG GCGGCATGGC GATCACCTAC CCACCGATGA CGCCGCCATT
GTGGCACACG CTGCCACTGA AGTTCCTGCA CTGTATGGGG TCAGTGACTG CGCCGTTGCG
GCCAGCGCCG TGGTGCGGTG GCCGGACGCC TTGGCCCCGG TGACTCCCAC GATGCGTGCG
GTGGCCTCCG CTGCGGTGGC AGCAACCACA GATTCGGGTC TTCACATTGC CGGCTCGTGG
GTGGCTGGCA CTGGGCTAGC AGCGACGATT CCTCATGCCC AGGGGGTTGC TGAGCGTATT
GTGAACTGA
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| Protein sequence | MTSVTIIGAG IAGLTAAHHL AVRGNKVTLV DASSQVGGFL APLQMSGPHG DLLLDAGAES
FATRAPAVSA LVTSLGLQVT SPEDRAGWCV PDRSSAFPLP SAGVLGIPVD PFAADARAAL
GWVGSVRAWV DRILPPRVGD TSNLDAFVRS RMGNKVADRL VSAIVGGVHS TSPTLLDVSA
IHPKFREYFA DEGTLTGVVK RIRAAAPAGR AVSGIVGGLH TLPSTLYQSI SAAGGTVLLD
EAVTALTQRD GRWVVQGTSG QDVSVSDHII IALPARPALA LLADTGIYDA GDQLNQVARG
TDIALATVVV HSKQLGSYPR GTGVLVSPDA GFQAKASTHA NAKWGWVDEA VISAFGPDHH
VIRLSFGRHG DHLPTDDAAI VAHAATEVPA LYGVSDCAVA ASAVVRWPDA LAPVTPTMRA
VASAAVAATT DSGLHIAGSW VAGTGLAATI PHAQGVAERI VN
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