| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_2485 |
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| Symbol | |
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| ID | 8381638 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 2668856 |
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| End bp | 2669917 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 645005250 |
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| Product | uroporphyrinogen decarboxylase |
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| Protein accession | YP_003162420 |
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| Protein GI | 256833693 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
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| TIGRFAM ID | [TIGR01464] uroporphyrinogen decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.481769 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACTCTGC CTAAAACCCA TCCTCTCATT TCTGCTGGTA CCGATTCGAG TTCTCTCGTA
CGCGCATTTC GTGGTTTACC TCACGACCAC ATTCCGGTGT GGTTCATGCG ACAAGCCGGA
CGGTCATTAC CGGAATATAT TGCGGCCCGA CGGGGAATTG GCATGCTCGA GTCATGCCTT
CGCCCCGATC TCGCCGCAGA GATCACCATG CAACCCGTTC GCCGCCACAA CGTAGACGCA
GCGATCTTCT TCTCTGACAT TGTCATTCCG TTGCGTCTTG CCGGGGTTGA TGTCGACATT
GTTTCCGGGG TTGGGCCAGT CCTGGGAAGC CCCATCCGCA CACAAGCAGA CCTGGACGCG
CTCGAGTCAC TCACCCTCAC CGAGGACGCC CTCGCCCCCA TCCGTGAAGC CATCACCCTC
ATCACCGCTG AACTCGGTTC ACGCCCCCTG ATCGGTTTTG CTGGTGCACC GTTCACCTTG
GCTGCCTACA TGGTGGAAGG ACGCCCGTCA CGTGATCACC TCGCCGCCCG GCACATGATG
GTGGGGCAAC CCGATCTGTG GGCCAGGCTC ATGACCTGGT GTGCCCGCGT GACCGGTCAG
TTCCTGCGCA CCCAAATACT GTCGGGGGCA AGCGCCGCAC AGCTCTTTGA CTCGTGGGCT
GGTTCGCTGA GCCGTGACTT GTACGTGGCA CACGTGGCAC CCGCATCGGC ACGCGTGTTC
GCCCACATCA GCGACCTGGA CGTTCCTCGG ATCCACTTTG GCACCCACAC CGGGCACCTG
CTGACCGACA TGCGGGAGGT CGGGGCAACA GTCATTGGGG TGGATTACCG CACGCCACTC
AGTGAAGCCA ACGCGATCCT CGGTGGCACC ACTCCCCTAC AAGGAAACAT CGACCCGGCC
TACCTTGGTG CACCATGGCC GGTGCTCGAA GACCACGTGC GCGCCGTGGT GGAATCAGGG
CGGGCCGCAC CTGGCCACGT GGTGAACCTT GGTCACGGGG TTCCACCAAC AACCGACCCC
ACCGTCCTGA CCCGCATCGT GGAACTGGTG CATTCACTGT GA
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| Protein sequence | MTLPKTHPLI SAGTDSSSLV RAFRGLPHDH IPVWFMRQAG RSLPEYIAAR RGIGMLESCL
RPDLAAEITM QPVRRHNVDA AIFFSDIVIP LRLAGVDVDI VSGVGPVLGS PIRTQADLDA
LESLTLTEDA LAPIREAITL ITAELGSRPL IGFAGAPFTL AAYMVEGRPS RDHLAARHMM
VGQPDLWARL MTWCARVTGQ FLRTQILSGA SAAQLFDSWA GSLSRDLYVA HVAPASARVF
AHISDLDVPR IHFGTHTGHL LTDMREVGAT VIGVDYRTPL SEANAILGGT TPLQGNIDPA
YLGAPWPVLE DHVRAVVESG RAAPGHVVNL GHGVPPTTDP TVLTRIVELV HSL
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