| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_2479 |
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| Symbol | |
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| ID | 8381632 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | - |
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| Start bp | 2662070 |
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| End bp | 2664292 |
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| Gene Length | 2223 bp |
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| Protein Length | 740 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 645005244 |
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| Product | glycoside hydrolase clan GH-D |
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| Protein accession | YP_003162414 |
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| Protein GI | 256833687 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3345] Alpha-galactosidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.312772 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGAGA CCTCACAACC CAACTGCCAC GCCATGACGT GCGACCACGC ACCAACACAA
CCCGTCCACC TGCGAGCAGG CGGTGTGTCA CTTGTCCTTG ACTCACCCAA CGCGCACCTT
CCCCGCATCC TGTACTGGGG TGAAGAACTC ACCGGAATCA CCGACACGTC GCTCGCTGCC
CTCGCCACCA TGACAACCCC CTCCGCCACC GGAGGCACCA TTGACACCCC AGCGATCACA
TCGATCATCA CCGAACCCTC TTCCGGATGG CCGGGCACCC CGGGCCTGAC CGGATCACGC
AACGGGCAAG CCTGGACAAC CGCATTTCGA GTCACCGGGT ATGACCTTGC CACCACAGAC
GCCGGTGATC TCACTACCCG CTGGTACGCA ACCGACACCG ATGCCGCCCT CACCATCACA
CTCACCATCA CGCTGCTGGT CACGGGTATT GTCCGGGCGC ACGCAGCAGT CACCAACGCC
GGCGACACCC CCTACCAAGT TGATCACCTG GGTGTAGCCT TCCCGTTCCC AGCCGAGGCG
ACAGAGGCGC TCGACTTTAC TGGACGGTGG GCGAGGGAAC GCGCCCCACA ACGCCGCCCC
CTCACCGTGG GAACACACCT GCGGGAAGCC GTGCGCGGCA AACCCGGCCA CGATGCCCCC
TACCTCACCG TCGTTGGGGA ACCCCACTTT GGGTTCCGGC ACGGTGAGGT GCGCGCGTTC
CACCTTGCCT GGAGCGGGAA CCAACGCATC GCGATCGACA CAACATTTTC TGGTGAGCAG
GTTGTTCGCG CCGGTGAATA CTTGCACCCC GGAGAAATTC AATTAGCACC AGGCGACACC
TACACAGGCC CTGCGGTGAT GGCTGTGTGG TCCGGGACCG GGTTGGACGG AGTGACCCAA
CGCTTCCACC AGCAGATGCG CGCCCGCAGC CGGTACCCTG CCTCCCCCCG ACCCGTGACC
ATCAATGTGT GGGAAGCAGT GTACTTTGAC CATGATGCGG CACGGTTGCG CGACCTTGCG
GAGCGCGCTG CCGCACTGGG GGTGGAACGG TACGTCCTTG ATGACGGCTG GTTTGGGTCA
CGCCGAGATG ACACCTCAGG GTTGGGTGAC TGGCAGATTT CCCACGAGGT GTGGCCCGGT
GACACCTTGC CGCAACTAGC GCAGTACGTC CACGATCTGG GGATGCAGTT CGGGATTTGG
TTCGAACCGG AAATGATCAA CCCCGATTCG GAGGTGGCCC GCCGCCACCC CGAGTGGGTT
CTCGCGCCAA CTGGTCGTCT TCCGCGTGAA GCCCGCCACC AGCAAGTCAT GGACTTAACT
AACCCCGAAG CGTTCGCCTA CGTGCGCGAC GCCATGGTCG AGGTGATCCG TCGGTGCAAC
GCCGATTATG TGAAGTGGGA TCACAACCGT GACCTGCTGG AATCAGGGTC ACAACTGACT
GGTCGGGCTG CTGTTCATGA GCAAACCTTG GCGGCCTACC GGCTCTTGGA TGAGTTGCGC
ACACAGTTCC CCCACCTGGA AATCGAATCC TGTTCTGGCG GTGGGGCGCG CATCGACTGG
GAGATTTTGC AACGCACCGA CCGAGTATGG GCGTCGGACT GTATTGATGC GCACGAACGT
CAGATGATCC AACGGTGGAC GTCCGTGGTC GTCCCCCCAG AGATGATGGG CTCCCATGTG
GGAGATGGGC GGGCACACAC CACCGGGCGG ATGCACGACA TTGACTACCG TGCGGGCACA
GCACTGTTTG GACATTTTGG GATTGAATGG GACTTGGCTC GTGCCACGGA CCGTGACCTC
GACTCGCTTC GTGCCTGGAT TGCACGGTAC AAGGAACTTC GCGGTTTGTT GCATTCAGGT
GTGACCGTGC GGTCAGACAT GGACGGTGCC GCTCACGGCA CCAGTGCGTG TCACGTTCAC
GGGGTGGTCG CCACAGACGG TACTGATGCG GTATTCGCGT TGGTATCGAC AGACCGCCCC
TCATCGTGGC CGGTGCGGCG GGTGGTGCTG CCTGGGCTTG ATCAGCAACG CACCTACACT
CTCGACGTCC TGTTCGCCCC GACGGAAATC AACGAACAAT CACACCGGCA ACCTGGCTGG
TGGGGGCAGC GTCTGACCGT GCAGGGGGCA GTGTTGTCTC GGGTCGGGTT GGCGCTGCCA
GACCTGAACC CAGACACCCT GATGTTGGTG CGGGTCACTG CTGTGGAAGG TGACGCTCAA
TGA
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| Protein sequence | MPETSQPNCH AMTCDHAPTQ PVHLRAGGVS LVLDSPNAHL PRILYWGEEL TGITDTSLAA
LATMTTPSAT GGTIDTPAIT SIITEPSSGW PGTPGLTGSR NGQAWTTAFR VTGYDLATTD
AGDLTTRWYA TDTDAALTIT LTITLLVTGI VRAHAAVTNA GDTPYQVDHL GVAFPFPAEA
TEALDFTGRW ARERAPQRRP LTVGTHLREA VRGKPGHDAP YLTVVGEPHF GFRHGEVRAF
HLAWSGNQRI AIDTTFSGEQ VVRAGEYLHP GEIQLAPGDT YTGPAVMAVW SGTGLDGVTQ
RFHQQMRARS RYPASPRPVT INVWEAVYFD HDAARLRDLA ERAAALGVER YVLDDGWFGS
RRDDTSGLGD WQISHEVWPG DTLPQLAQYV HDLGMQFGIW FEPEMINPDS EVARRHPEWV
LAPTGRLPRE ARHQQVMDLT NPEAFAYVRD AMVEVIRRCN ADYVKWDHNR DLLESGSQLT
GRAAVHEQTL AAYRLLDELR TQFPHLEIES CSGGGARIDW EILQRTDRVW ASDCIDAHER
QMIQRWTSVV VPPEMMGSHV GDGRAHTTGR MHDIDYRAGT ALFGHFGIEW DLARATDRDL
DSLRAWIARY KELRGLLHSG VTVRSDMDGA AHGTSACHVH GVVATDGTDA VFALVSTDRP
SSWPVRRVVL PGLDQQRTYT LDVLFAPTEI NEQSHRQPGW WGQRLTVQGA VLSRVGLALP
DLNPDTLMLV RVTAVEGDAQ
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