Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_2450 |
Symbol | |
ID | 8381603 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | + |
Start bp | 2627575 |
End bp | 2628471 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 645005215 |
Product | protein of unknown function DUF58 |
Protein accession | YP_003162385 |
Protein GI | 256833658 |
COG category | [R] General function prediction only |
COG ID | [COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.675441 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.00731515 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | ATGACCGATA TTTCCCGGCT TGCTCAGGTG CGAGCCCACG TGGATCTTCC GATTTTGAAG CGGGCGGCTG GCCTGCTTGA GGGGTATCAC CGGTCCATTT TTAAAGGACA CGGCCAGGAT TTTGACGACT TGTCGTTGTA TTCGCCTGGT GACGATGTCT CGGACATTGA CTGGAAGTCA TCGGCGCGTG CCGGGATCCC TATTATTCGC CGGTTTCAGC AGCAGTCGAA TCTCTCGGTG ATTCTTGTTG CGGACACCGG GCGCAACATG GCGGCGATGT CGTCTGGGGG TACCCCCAAA AGTGATGCTG CGGTGTTCCT GGCCACGTTG ATTGCGTATG TGGCCCGGGA TCGCGGCGAT CGGGTGGCTC TTGTTGCCGG CGATCATGAC CGGTTAATCC ACCGCCCACC GCGTGCCTCA ACTCAGGACC TTGAGGTGAT GCTCACCCAA TTGGATGCCA CGTTCTCACC AACTGCTCCT GCCAGTGACC TTGCCGCCAT TTTGCGGCGT ACTCTCACGT TGTTTCACCG GCGGGCCCTG GTTGTCATTG TCACTGATGA GGTGCGCCCT GCACCGGAGC ACGAAGAGAT TTTGCGGCAA TTGCGGGTGC GGCACGAAGT GCTTGTTCTG CAAATTTCTG ATGCGTCCCC GTTTGTCGGT GCGCGCCTGA ATAATGGGCA GCAGGTCGCC GATGTGGACC GGCCTCTTCA CCTGCCCAGG TTCCTTGCCC GCCGTTCATC CATTCATGCC GAGGCCGCCC AGTTGGTGCG CCAACGGCGT GCGGACTCGC AACGCATGTT GCAGCGAAAC GGCATCGTGT CTGTGGTCAT TGACACCCCC GAAGATGCGA TCACTCGCTT CACCCATGCG GTACGCAAAC AGCGCCATCT GACCTAG
|
Protein sequence | MTDISRLAQV RAHVDLPILK RAAGLLEGYH RSIFKGHGQD FDDLSLYSPG DDVSDIDWKS SARAGIPIIR RFQQQSNLSV ILVADTGRNM AAMSSGGTPK SDAAVFLATL IAYVARDRGD RVALVAGDHD RLIHRPPRAS TQDLEVMLTQ LDATFSPTAP ASDLAAILRR TLTLFHRRAL VVIVTDEVRP APEHEEILRQ LRVRHEVLVL QISDASPFVG ARLNNGQQVA DVDRPLHLPR FLARRSSIHA EAAQLVRQRR ADSQRMLQRN GIVSVVIDTP EDAITRFTHA VRKQRHLT
|
| |