| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_2447 |
|---|
| Symbol | |
|---|
| ID | 8381600 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jonesia denitrificans DSM 20603 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013174 |
|---|
| Strand | + |
|---|
| Start bp | 2623099 |
|---|
| End bp | 2624268 |
|---|
| Gene Length | 1170 bp |
|---|
| Protein Length | 389 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 645005212 |
|---|
| Product | chitin-binding domain 3 protein |
|---|
| Protein accession | YP_003162382 |
|---|
| Protein GI | 256833655 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3397] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.0284927 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAATTT GGTCTGCTTT TCGAAATCGA TGGGCGAAAT TCGCCGCTGG AGGGGCCATT
GGGTCCCTCC TTGTGTTGGG GTCCGTTGTC ACCACGTCAG CTCCCGCAAG CTCACACGGT
GGCATGGTGT ACCCGGCAAC ACGTACCTAC AACTGTTACC TTGACGGCCT CGCGGGTGGT
GATGCCGCTG GTCAGGGCGG TAACATGCTG CCAACGAACC CGATCTGCAA GGAAGCGTTG
GATTATTCAA GCTACCCGTT CTATACCTGG TACGGGAACT TGCTGCCGTT AGTTGATGGC
CGCCACCAGG AAACCATCCC AGACGGGAAA TTGTGTGGTC CTGGCGCCCA GTTTGACGCA
TTCAACACCC CGTCAGAGCA TTGGCCTACC ACTGCGCTTG AGTCTGGTGA CGACATCACT
TTCCGGTACG CAGCAACGGT GCCTCACCCT GGATGGTGGT ACCAGTACAT CACCAAAGAA
GGGTGGGACC CTTCACAGCC GTTGAGTTGG GATGACCTGG AACTGTTTGA CGAAGTCCTT
GACCCACCGA TTGTGCAGGG GTCGACTGGG CCGGAGTACC AGTGGGATGC GCAACTGCCT
GAGCGCAGCG GCCAGCACAT CATCTTCTCA ATTTGGGAGC GGACGGACTC TCCTGAGTCG
TTCTACAACT GCTCCGATGT GGTGTTTGGT GGCGGCGACC CCACCGACCC AGGTGAAGAA
CCCACCGACC CAGGTGAAGA ACCCACCGAC CCAGGTGAAG AACCCACCGA CCCAGGTGAA
GAACCCACCG ACCCAGGTGA AGAACCCACC GACCCAGGTG AAGAACCCAC CGACCCTGGT
ACTGGTCCTG ATGACCCCCG TGAATGTGCT GTGGCGTTTG AGGTGAACTC GTGGAACTCG
GGGTACACCG CTGAGGTGAC CGTGGCCAAC AACACGATGG ACCAGGTTGA TGGTTGGGAC
CTGGCAGTGA CGTTTGCAGG TGATGATTCG GTTCAGCAGT CGTGGAGTTC GACGGTGAGC
CAGTCAGGGA AAACTGCGAC CTTCACAAAT GCTGCGTGGA ACTCAACGAT TGCCCACCAT
GGTGCGGTGT CGTTCGGGTT CTTGGCGAAC GGTGCTCCCT CTGATCCCAC TGAGGTCACG
TTGAATGGTG AACCGTGTGA TCTGTACTAA
|
|---|
| Protein sequence | MSIWSAFRNR WAKFAAGGAI GSLLVLGSVV TTSAPASSHG GMVYPATRTY NCYLDGLAGG
DAAGQGGNML PTNPICKEAL DYSSYPFYTW YGNLLPLVDG RHQETIPDGK LCGPGAQFDA
FNTPSEHWPT TALESGDDIT FRYAATVPHP GWWYQYITKE GWDPSQPLSW DDLELFDEVL
DPPIVQGSTG PEYQWDAQLP ERSGQHIIFS IWERTDSPES FYNCSDVVFG GGDPTDPGEE
PTDPGEEPTD PGEEPTDPGE EPTDPGEEPT DPGEEPTDPG TGPDDPRECA VAFEVNSWNS
GYTAEVTVAN NTMDQVDGWD LAVTFAGDDS VQQSWSSTVS QSGKTATFTN AAWNSTIAHH
GAVSFGFLAN GAPSDPTEVT LNGEPCDLY
|
|---|
| |