Gene Jden_2430 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_2430 
Symbol 
ID8381583 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand- 
Start bp2603473 
End bp2604096 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content58% 
IMG OID645005194 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003162365 
Protein GI256833638 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.466149 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAGAT ACGCGCGCGG GAAATCAACC CGTGAGGAGA TCATCAAAGA AGCGATGATC 
GTGTTTGCCA AGAACGGGTA TTACGAAGCG TCACTACGTG ATATTTCCGC CCGTGTTGGC 
ATCTCCCACC CCGGGTTGCT CCACCACTTC CCATCCAAGA GCGACCTGTT GTTGGCCGTG 
TTGGATGCGC GTGACGCCGA GGATGTGCGC ATCACGTTGC CGTTGCTGGA GCAGGGCTAT 
GACTTGGTCG ACGCGATCGT GGAGTTGGCG GAGCGCAACA TGGAGCGCCC GGGGATGGTG 
TCGTTGTTTG CGAAGTTGAG TGCGGAAGCA ACGGACCCGG CGCACCCTGC CCATGAATAT 
TTTTCGGAGC GCTACCGGCG CACCCTTGAG GGATACACCC TCTATTTTGA GGAGTTACGC 
CGCCAAGAGA AGTTGTCACC CACGCTTGAT CCAGCGGAAG TGGCCAAAGC GCTGGTGGCG 
TTAATGGATG GGCTGCAAGT GGTGTGGTTA TACGGGTGGC GGTCAGGTCT CCCTGACCGC 
CACGTCGATA TGCCACGCAT CGTGCGCGAG TTTCTCTCCT TCACTGGGCG TGGGAACACC 
CCGGAGACAG TTACAACCGG ATGA
 
Protein sequence
MARYARGKST REEIIKEAMI VFAKNGYYEA SLRDISARVG ISHPGLLHHF PSKSDLLLAV 
LDARDAEDVR ITLPLLEQGY DLVDAIVELA ERNMERPGMV SLFAKLSAEA TDPAHPAHEY 
FSERYRRTLE GYTLYFEELR RQEKLSPTLD PAEVAKALVA LMDGLQVVWL YGWRSGLPDR 
HVDMPRIVRE FLSFTGRGNT PETVTTG