Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_2418 |
Symbol | |
ID | 8381571 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | - |
Start bp | 2592847 |
End bp | 2595087 |
Gene Length | 2241 bp |
Protein Length | 746 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 645005182 |
Product | protein serine/threonine phosphatase |
Protein accession | YP_003162353 |
Protein GI | 256833626 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.724517 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTGTGC CGCCACAAGA TCGAACAATG AACGTTCACA TTTCTGGCGA GTTGGCGCCT GAAATTGAGG ACTCCCCGGT CCCGTATGTC CTGCTCAAGG GCGAGTTTTC ACCTCCTGTT GTGGAGGCAT CAAACCGCGC CTTTCGTGAG TTGTTAGGGG TGGACTCCAC CCCATCTGGT CAAACGTTCA ACGACCTGAA AATCACCCTC CGTCGGCAAG ACAAACGCAC GGGGAACATT GAAACTTGGG GCCCACAAGC GTCACGTCGT GGATCGGGTG GGGGCAGCGC TGTGAGTACA CGTCACATCC CGTCACCCGC AGAGGCACTC TGGCGGCACG GTGAAGAGGT GCGCTCTCAC CAAGTGTTGC GAGGTGAGGT GTGGACCGCG GACCTGGTCC ACTCGGAGGG GTCCTGGGGC ATCGTTCAAG CAGTTATCGC CCCGTTGGCC ACTTCGCCAG GTGCCTCGCA GCGCTGGGTT GTCCAGTTTC TCCCGCTGAC GGGGTTTGAT GAAGCATTCG GGTACGCGGC TCCCGCCGCA GAACGAGCAC TGGACGCGTT ATCCCAGATT TCGGAATTGC TCTCCGCAGA AAGCCAAACT TCTCCGCTCG CGGAGATCTC TCGCATTCTT GAAGCAACGT TCCCAGTTGA TTGGGTGGGG TTTTTCCTCG AGGGCAAGGG GCTGGAGTAT TCCGAGACGA TCCGTCCACC TGCGCGCCCA CGCCACCGAG GTGACTACCG CAGTCGAGAC GTGGATGGGA GCGGGGCGGT AGACCCCGTT CTCCAGGTGC TTGTTGGAAA ACGGATTGAC CCAGTGTTGT TGCCGTGCGG GTTTGACGCT GAGGAATCGA CGCGAACCCG GGCGTTCATG GACCATTTAG ATGATGTGTG GGACGTCCAC GGGTTCACCC CACGTGGACC ACTCATCATA CAGGCGATCC TGGGACGGTC AGGGGTCCTT GGGGCGATTG TGATGGCGTG CCCAGAAACC AATGAACTGG GGGAACCCTT TGAGGTCCCT GATTTGGGTA CGGAAAGCCT CAAAGTGTTG TCCGCCGTGT CACGACGCAT TGGGACTACG TTGGACAATG CACGGTTGTA CAAACACGAG CATGAGCTCG CTGAGGCGTT GCAACAGTCC ATGTTGCCGA CCCAAGTGGA TGTGGCCGGG TTAGATGTAT GGACCTATTA CGCACCGTCG AATGAGCACG CCCGGGTGGG TGGTGACTGG TACGACATTT TGTATGTTGA CGAGCAGACG GTGGGTGTTG TGGTTGGCGA TGTTGTCGGC CATGACCTGG AGGCTGCCGC CGCGATGGGT CAGCTTCGCT CGATCACACG GTCGTACGCC TTTGACCGGG TGAGCGCGTC GAAGGTGATT GAACGCGTGG ACCGGTTGGT GGATGGGCTG GACATTCCTC GCCAGGCGTC CATGGTGTAT GGCCGGTTGC GTGAGAGTAA GTCACGAGGA ACCTGGCAGT TGGAGTATGC ACGCGCTGGT CACCTTCCTC CCATTTTGGT GCGGGATGGG GAAGCGATTT TGTTAGACGA TGCGGGCGGC GGGTTGATCG GTTTTCTGCC GCGTCCGCGT TCCTCGGCGA CGATCCGGTT GCGTCCAGGT GATGTGGTGT TGTTTTACAC CGATGGGCTT ATTGAGCGTC GAGACCGGTC CATGCAGGCG GGGGTTAAGG AACTGCAGGA GTTCGCGCAA ACCGTTCCGC AGTGTGCTGC GGATCAGTGG GGTGAGTTGT TGTTGCGTGC GCTTGCGGAC GCTCCTGAAG ATGATGTGGC TCTTGTGGTG GTGCGCATAC CGGTACGTGA TGAGTTGTCG GTTCAGGGAA TGGATTTGGC GCGGTCCTAT CGGGCGACGT TTCCTGGGGA TCCCAGTTCA GTGGCCCGAG CCCGACATGT GATTATGCGA TTATGTGACG AGTGGGATAA ACCACACACA ACGTTTGCGG AGTTGGTCAT GTCTGAACTC GCCGCCAACG CGGTGTTGCA CGGGTATGGT CAGTTTGCGT TACGAGTGTA TGACCTCGGT GAAGACCTGC GCATCGAGGT AGAGGACCAA AACCCGATTG GTCCGATCCG GATGGATGGT CACGGTGACC GCTACGGCGG GTATGGAGTA AAGATTGTGG ACCGGCTGGC GAACTGGGGG TGGAGCCCTA AAGGAGCCGG AAAGGTTGTG TGGGCTCACG TTCCGGTGAC GCAGGAGCGT GGCGCCCCAG AAGTTCGATG A
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Protein sequence | MGVPPQDRTM NVHISGELAP EIEDSPVPYV LLKGEFSPPV VEASNRAFRE LLGVDSTPSG QTFNDLKITL RRQDKRTGNI ETWGPQASRR GSGGGSAVST RHIPSPAEAL WRHGEEVRSH QVLRGEVWTA DLVHSEGSWG IVQAVIAPLA TSPGASQRWV VQFLPLTGFD EAFGYAAPAA ERALDALSQI SELLSAESQT SPLAEISRIL EATFPVDWVG FFLEGKGLEY SETIRPPARP RHRGDYRSRD VDGSGAVDPV LQVLVGKRID PVLLPCGFDA EESTRTRAFM DHLDDVWDVH GFTPRGPLII QAILGRSGVL GAIVMACPET NELGEPFEVP DLGTESLKVL SAVSRRIGTT LDNARLYKHE HELAEALQQS MLPTQVDVAG LDVWTYYAPS NEHARVGGDW YDILYVDEQT VGVVVGDVVG HDLEAAAAMG QLRSITRSYA FDRVSASKVI ERVDRLVDGL DIPRQASMVY GRLRESKSRG TWQLEYARAG HLPPILVRDG EAILLDDAGG GLIGFLPRPR SSATIRLRPG DVVLFYTDGL IERRDRSMQA GVKELQEFAQ TVPQCAADQW GELLLRALAD APEDDVALVV VRIPVRDELS VQGMDLARSY RATFPGDPSS VARARHVIMR LCDEWDKPHT TFAELVMSEL AANAVLHGYG QFALRVYDLG EDLRIEVEDQ NPIGPIRMDG HGDRYGGYGV KIVDRLANWG WSPKGAGKVV WAHVPVTQER GAPEVR
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