Gene Jden_2418 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_2418 
Symbol 
ID8381571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp2592847 
End bp2595087 
Gene Length2241 bp 
Protein Length746 aa 
Translation table11 
GC content59% 
IMG OID645005182 
Productprotein serine/threonine phosphatase 
Protein accessionYP_003162353 
Protein GI256833626 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2208] Serine phosphatase RsbU, regulator of sigma subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.724517 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTGTGC CGCCACAAGA TCGAACAATG AACGTTCACA TTTCTGGCGA GTTGGCGCCT 
GAAATTGAGG ACTCCCCGGT CCCGTATGTC CTGCTCAAGG GCGAGTTTTC ACCTCCTGTT
GTGGAGGCAT CAAACCGCGC CTTTCGTGAG TTGTTAGGGG TGGACTCCAC CCCATCTGGT
CAAACGTTCA ACGACCTGAA AATCACCCTC CGTCGGCAAG ACAAACGCAC GGGGAACATT
GAAACTTGGG GCCCACAAGC GTCACGTCGT GGATCGGGTG GGGGCAGCGC TGTGAGTACA
CGTCACATCC CGTCACCCGC AGAGGCACTC TGGCGGCACG GTGAAGAGGT GCGCTCTCAC
CAAGTGTTGC GAGGTGAGGT GTGGACCGCG GACCTGGTCC ACTCGGAGGG GTCCTGGGGC
ATCGTTCAAG CAGTTATCGC CCCGTTGGCC ACTTCGCCAG GTGCCTCGCA GCGCTGGGTT
GTCCAGTTTC TCCCGCTGAC GGGGTTTGAT GAAGCATTCG GGTACGCGGC TCCCGCCGCA
GAACGAGCAC TGGACGCGTT ATCCCAGATT TCGGAATTGC TCTCCGCAGA AAGCCAAACT
TCTCCGCTCG CGGAGATCTC TCGCATTCTT GAAGCAACGT TCCCAGTTGA TTGGGTGGGG
TTTTTCCTCG AGGGCAAGGG GCTGGAGTAT TCCGAGACGA TCCGTCCACC TGCGCGCCCA
CGCCACCGAG GTGACTACCG CAGTCGAGAC GTGGATGGGA GCGGGGCGGT AGACCCCGTT
CTCCAGGTGC TTGTTGGAAA ACGGATTGAC CCAGTGTTGT TGCCGTGCGG GTTTGACGCT
GAGGAATCGA CGCGAACCCG GGCGTTCATG GACCATTTAG ATGATGTGTG GGACGTCCAC
GGGTTCACCC CACGTGGACC ACTCATCATA CAGGCGATCC TGGGACGGTC AGGGGTCCTT
GGGGCGATTG TGATGGCGTG CCCAGAAACC AATGAACTGG GGGAACCCTT TGAGGTCCCT
GATTTGGGTA CGGAAAGCCT CAAAGTGTTG TCCGCCGTGT CACGACGCAT TGGGACTACG
TTGGACAATG CACGGTTGTA CAAACACGAG CATGAGCTCG CTGAGGCGTT GCAACAGTCC
ATGTTGCCGA CCCAAGTGGA TGTGGCCGGG TTAGATGTAT GGACCTATTA CGCACCGTCG
AATGAGCACG CCCGGGTGGG TGGTGACTGG TACGACATTT TGTATGTTGA CGAGCAGACG
GTGGGTGTTG TGGTTGGCGA TGTTGTCGGC CATGACCTGG AGGCTGCCGC CGCGATGGGT
CAGCTTCGCT CGATCACACG GTCGTACGCC TTTGACCGGG TGAGCGCGTC GAAGGTGATT
GAACGCGTGG ACCGGTTGGT GGATGGGCTG GACATTCCTC GCCAGGCGTC CATGGTGTAT
GGCCGGTTGC GTGAGAGTAA GTCACGAGGA ACCTGGCAGT TGGAGTATGC ACGCGCTGGT
CACCTTCCTC CCATTTTGGT GCGGGATGGG GAAGCGATTT TGTTAGACGA TGCGGGCGGC
GGGTTGATCG GTTTTCTGCC GCGTCCGCGT TCCTCGGCGA CGATCCGGTT GCGTCCAGGT
GATGTGGTGT TGTTTTACAC CGATGGGCTT ATTGAGCGTC GAGACCGGTC CATGCAGGCG
GGGGTTAAGG AACTGCAGGA GTTCGCGCAA ACCGTTCCGC AGTGTGCTGC GGATCAGTGG
GGTGAGTTGT TGTTGCGTGC GCTTGCGGAC GCTCCTGAAG ATGATGTGGC TCTTGTGGTG
GTGCGCATAC CGGTACGTGA TGAGTTGTCG GTTCAGGGAA TGGATTTGGC GCGGTCCTAT
CGGGCGACGT TTCCTGGGGA TCCCAGTTCA GTGGCCCGAG CCCGACATGT GATTATGCGA
TTATGTGACG AGTGGGATAA ACCACACACA ACGTTTGCGG AGTTGGTCAT GTCTGAACTC
GCCGCCAACG CGGTGTTGCA CGGGTATGGT CAGTTTGCGT TACGAGTGTA TGACCTCGGT
GAAGACCTGC GCATCGAGGT AGAGGACCAA AACCCGATTG GTCCGATCCG GATGGATGGT
CACGGTGACC GCTACGGCGG GTATGGAGTA AAGATTGTGG ACCGGCTGGC GAACTGGGGG
TGGAGCCCTA AAGGAGCCGG AAAGGTTGTG TGGGCTCACG TTCCGGTGAC GCAGGAGCGT
GGCGCCCCAG AAGTTCGATG A
 
Protein sequence
MGVPPQDRTM NVHISGELAP EIEDSPVPYV LLKGEFSPPV VEASNRAFRE LLGVDSTPSG 
QTFNDLKITL RRQDKRTGNI ETWGPQASRR GSGGGSAVST RHIPSPAEAL WRHGEEVRSH
QVLRGEVWTA DLVHSEGSWG IVQAVIAPLA TSPGASQRWV VQFLPLTGFD EAFGYAAPAA
ERALDALSQI SELLSAESQT SPLAEISRIL EATFPVDWVG FFLEGKGLEY SETIRPPARP
RHRGDYRSRD VDGSGAVDPV LQVLVGKRID PVLLPCGFDA EESTRTRAFM DHLDDVWDVH
GFTPRGPLII QAILGRSGVL GAIVMACPET NELGEPFEVP DLGTESLKVL SAVSRRIGTT
LDNARLYKHE HELAEALQQS MLPTQVDVAG LDVWTYYAPS NEHARVGGDW YDILYVDEQT
VGVVVGDVVG HDLEAAAAMG QLRSITRSYA FDRVSASKVI ERVDRLVDGL DIPRQASMVY
GRLRESKSRG TWQLEYARAG HLPPILVRDG EAILLDDAGG GLIGFLPRPR SSATIRLRPG
DVVLFYTDGL IERRDRSMQA GVKELQEFAQ TVPQCAADQW GELLLRALAD APEDDVALVV
VRIPVRDELS VQGMDLARSY RATFPGDPSS VARARHVIMR LCDEWDKPHT TFAELVMSEL
AANAVLHGYG QFALRVYDLG EDLRIEVEDQ NPIGPIRMDG HGDRYGGYGV KIVDRLANWG
WSPKGAGKVV WAHVPVTQER GAPEVR