| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_2398 |
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| Symbol | |
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| ID | 8381552 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | - |
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| Start bp | 2564979 |
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| End bp | 2566538 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 645005159 |
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| Product | Xylan 1,4-beta-xylosidase |
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| Protein accession | YP_003162334 |
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| Protein GI | 256833607 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3664] Beta-xylosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.274955 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATGTCG TTCCATCAAC CCCTGTTGCC CAGCTCACCG ATGCGTGGCG CGCCTGTGTG
GGAACTGGCC GGATGGGGTT GTCCCTGCGC CAGGGCCACA GTGACGCGGT GAAGAAAGCG
GTTGCGGACA TTGGGTTCCA GTCGATCCGC GGGCACGGCA TGTTCCACGA CGATATGGGA
ATCATCAAGG TCAGCGAGGT GGGTGGCGAA CGGGTTGTTC GCTACTCGTT TCTCTACCTT
GACCAGGTTA TTGACTCCTA CCTTGAGGCT GGGGTGACCC CACTGCTGGA GTTGGGGTTC
ATGCCGGAGG TGTTGGCGTC AGGGGACCAA ACGGTGTTCT GGTGGAAAGG GAAGGTCACC
CCACCTGCTG ACTATGACGC CTGGTGCGAG CTTGTTCAGG TGACTTTGCG GCACCTTATT
GACCGGTACG GTGCAGAAGC TGCGGTGAGC TGGCCCATTG AAGTGTGGAA CGAACCAAAC
CTCACCGTGT TTTGGAAGGA CGCCGACCAG GACGAATACT TCCGTTTGTA CGAGCGCACA
GCCCGAGCCA TTAAAACAGT CGATGCGCGA TTCCAGGTGG GTGGGCCCGT CCTATCCCCA
GGGTCTGACC ACTGGTGGGC GCCGTTTATC GCGTTCATTG AACGCACCGG CGCGCCCATT
GATTTTGTGT CCCGCCACGC CTACACCTCC GGCCCCGCTG AGCATGTTCC GTTCGGGGTG
TACCAAACCC TCATGGAACC ACAGCACCTC ATTGACCAGT TTGCGATCCC CAGCGAGGAA
CTGAAAGGCA CCACCCTACA AGGGCTGCCC GTCCACATTT CCGAGTACAA CACGTCCTAC
CGGCCCGACA ACCCCGTTCA CGACACCGCG TACAACGCCG CCTACCTTGC CCCTGTGCTT
GCCCGCGGCG GTTCAACGGG CGTCGCGTCA TTCTCCTACT GGACCATCAG CGACGTCTTT
GAAGAAGAAG GTGTCCCGCG TGCGTTGTTC CACGGTGGGT TCGGGCTCCT CACCCACGGC
AACATTCCCA AACCCACCTA CCACCTGTTC GCATTCATGG CAGCGATGGG CACCGACATT
CTCTCGACCG GGGATGACCA CCTGGTCACC CGACACCCAG ACGGTCACAT CGCTGTCCTT
GCCTGGCACC CGGTTACCGG AGAACCCGCT ACCCCCACCG CTGGACACAC CGTGAGCTTG
TCCATTCCCC TAGACCCCAC CAGCGCACCC ACAGCCGGGG CGCACACACC CGGGAAACCC
GCCCCCGCAT CGGCAGCCTA CGCCAGCCGC CAACGCGTCA ACGACACCCT CGGAAATGCG
TTCACCGCCT GGCAAACGAT GGGCCGCCCG CCAGCACCCA CCCGCCAGCA GATGCGCCAC
CTCCACCTCG CCGCCACCCC ACACCACACC GTGACCACCC ACACCATCAC TGACGGCCGC
GTCGACCTGA CCCTCACCCT GGACCGCCAC GAAATCACCC TCGTGGAACT CACCGCCACC
ACCAACGCCA CCGAACCATG GATCGACGAC ACCCGAATCC CCGGTCACGC CACCGCCTAA
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| Protein sequence | MHVVPSTPVA QLTDAWRACV GTGRMGLSLR QGHSDAVKKA VADIGFQSIR GHGMFHDDMG
IIKVSEVGGE RVVRYSFLYL DQVIDSYLEA GVTPLLELGF MPEVLASGDQ TVFWWKGKVT
PPADYDAWCE LVQVTLRHLI DRYGAEAAVS WPIEVWNEPN LTVFWKDADQ DEYFRLYERT
ARAIKTVDAR FQVGGPVLSP GSDHWWAPFI AFIERTGAPI DFVSRHAYTS GPAEHVPFGV
YQTLMEPQHL IDQFAIPSEE LKGTTLQGLP VHISEYNTSY RPDNPVHDTA YNAAYLAPVL
ARGGSTGVAS FSYWTISDVF EEEGVPRALF HGGFGLLTHG NIPKPTYHLF AFMAAMGTDI
LSTGDDHLVT RHPDGHIAVL AWHPVTGEPA TPTAGHTVSL SIPLDPTSAP TAGAHTPGKP
APASAAYASR QRVNDTLGNA FTAWQTMGRP PAPTRQQMRH LHLAATPHHT VTTHTITDGR
VDLTLTLDRH EITLVELTAT TNATEPWIDD TRIPGHATA
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