Gene Jden_2389 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_2389 
Symbol 
ID8381832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp2553359 
End bp2554255 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content32% 
IMG OID645005150 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_003162325 
Protein GI256833598 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.186959 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAA TAATCTTAAC AATTTTAATT ATACTAATTT TGCTGTATTG TTTTGTGCAA 
GCGATAAGAT TAAGGAAAGC TCTAGAGGAA TCTAAGAAAC GTTTTAAAGA ATATAATGCT
ATGATTGTGG ATTTATCATA TGGAAAAATG GAATATTTAG ATAGGGGCCA AGGAGAAATA
ATACTTTCAA ATCACGGGCT ATTTGGAGGT TTTGACCAAG CTTTTGAAAA TGTCATCGAT
TTTTCTAAGA AAAATCGTAT AATTGCTCCA TCAAGGTTTG GATACTTAAA AAGTGATGTT
TTAGGAAATG GCACGCCAAA AGAGCAAGCA AAAGCTTATA TTGAACTTTT GGACAAACTA
AAAATAAATA AAGTATTTGT TATGGGGGCA TCTGCGGGAG GTACTGTAGC AATCAGATTT
GCGCTTGACT ATCCTGAAAG ATGTAAAGGG CTAATTTTAT ATTGTTCGGC CATTCCAGAA
ATAGAAAAAC CTTCAAATAT AAATTTAAAG CAAGGGCCTC CTGATTTTAT GGTGGGTGAT
TATGCAATGT TTATTTTAAG TCCATTTTTC AAGACAACTA TTGGAATGGA TCCATCAATA
ATTAATAGCA TGCTGCCTAT CAATGCCAAG AAATTAGGAA TTAAACTAGA TAGTGAAGTT
ACAAATCCTG ACATGGCAGT CAATTTTGAA GATTATAAAA TTGAGTCACT AAAAGTGCCC
ACATTAATCC TGCAATCAAA GGATGACAAG CTGATAGATA TAAATAAAAC CATGGAAGTA
TCTAAAAGAT TTCCAAATCT AACCTTGAAG ATTTTCGAAA CTGGTGGGCA CATGATGCAG
GGAAATGGAG AGGAAATCAA GGCTACAGTA AATAATTTTA TTAGTAAGTA CAAATAA
 
Protein sequence
MKKIILTILI ILILLYCFVQ AIRLRKALEE SKKRFKEYNA MIVDLSYGKM EYLDRGQGEI 
ILSNHGLFGG FDQAFENVID FSKKNRIIAP SRFGYLKSDV LGNGTPKEQA KAYIELLDKL
KINKVFVMGA SAGGTVAIRF ALDYPERCKG LILYCSAIPE IEKPSNINLK QGPPDFMVGD
YAMFILSPFF KTTIGMDPSI INSMLPINAK KLGIKLDSEV TNPDMAVNFE DYKIESLKVP
TLILQSKDDK LIDINKTMEV SKRFPNLTLK IFETGGHMMQ GNGEEIKATV NNFISKYK